Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02662 ATGCAAGACTTTTTGGGCTCTCTTCGCCGGTCCCTGGTTTTCCGAGCCGGCGGCGACGATGCTCCTTTTGCCGGAATCGCCGACAAGCTTGGCTCTGCCATTCGCAAATCGCGAATAGCATTGAAACCTCCTCCTCCTCCCATCCGGTGGCGCAAGGGCGAGTTGATTGGTTCCGGCGCCTTCGGTCACGTCTACATGGGAATGAACCTCGATTCCGGGGAGCTTATTGCCATCAAACAGGTTTTAATCGCTCCTGGTAGCGCTTACAAGGAGAATACACAGGCTAATATTCGGGAGCTCGAAGAAGAAGTCAAGCTTCTCAAGAATCTTAAGCATCCAAATATTGTTAGATACTTGGGAACTGCGAGAGAGGAGAATTCCTTAAATATTCTGCTGGAGTTTGTACCTGGTGGTTCAATCTCATCACTTTTGGGGAAATTTGGATCCTTCCCTGAATCCGTTATAAGAATGTATACGAAACAGCTTTTATTGGGCCTTGAATACCTTCACAATAATGGGATTATTCACAGAGATATTAAGGGAGCCAACATTCTAGTTGATAACAAAGGGTGCATTAAACTTGCAGACTTTGGTGCATCCAAGAAAGTTGTTGAACTGGCTACTATCAATGGTGCAAAATCAATGAAGGGCACACCACACTGGATGTCCCCTGAAGTTATTTTACAAACAGGACATACAATCTCCACTGATATATGGAGTGTTGCATGCACTGTGATAGAGATGGCCACAGGGAAGCCTCCATGGAGTCAACAATATCCCCAAGAGGTTTCAGCTCTTTTCTATATTGGGACAACGAAATCTCATCCACCCATACCCGAACATCTGTCTGCTGAGGCAAAGGACTTTTTGCTGAAATGTTTCCACAAGGAGCCAGATTTAAGGCCTTCTGCATCAGAGTTGTTACAGCATCCGTTCATCACCTGTGACTATCATGGATCTCATTCAGTCTTACGCAGTTCAAGCAGGGATTCTTGCAATAAGATGGCAACATATGGAATGAACTCTAGAACCTTCTTGGATTCTGTCCAGGGATCAACTTGCACTGGCTTGAAGGATGTTTGTCAGATAGATAGCATAAAGTTCTCAACTGTATATCATAAAGCAGATTCCTACCAGAGAGCGGACAACAATGATGATGACATGTGTGTGATGGATGAAGATGATTTTTTGATCGGTTCACCAGTAAAATCTGAATCTCTATTAGCTTCTGATGATAACAAGAGTTGCAATTCTTTGAGCAAACCTGCGGATGACCATCCTTGCAATTTTAATGAAACCCAATATTCAGAGAAAAACAGACCGAACTTGTCATTTTCAAGTGAGCCTCCAGGAACTGAAGATGATGAAGAAGTCACTGAATGTAAAATTAGAGACTTCCTTGATGCTAAGGCCCTTGAACTGAAGAAGCTCCAAACACCTCTTTATGAAGAATTCTTTAACATATCAAATGCAGCCATTGCTCCTACTCCCTTTGCAAAGAGTAAAGCTATTTCGGGTGTCCCAAATGTAACATCAAAAGTCAGATCGCCTAGTCAGGCTTGGAGACGATTCTCAATGATTGGCAGTGCTAGTGTAGCAAGCCCTGGGAGTCATACCAAATACCGATCGAAGCATAGTGGTGCTCACTGTCAACCTTTGCAAGAAATTCAGCCACCTGAGCTGAACGAATCAAAGGAGACTCTTCATGATGCTGAGCTAGAATCATCTAGTGTAAGCTCAAACTTCTCTGAGAGGCAAAGGAAATGGAAAGAAGAATTGGTTGAAGAGCTCGAGAGGACGCGAGAGATTATGCGTCGGGCCGGAACTGGAGGAAGGATTACATCTCCAAAGGATCGCAAATTTTATGAAGACTGA 1875 0.4395 MQDFLGSLRRSLVFRAGGDDAPFAGIADKLGSAIRKSRIALKPPPPPIRWRKGELIGSGAFGHVYMGMNLDSGELIAIKQVLIAPGSAYKENTQANIRELEEEVKLLKNLKHPNIVRYLGTAREENSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHNNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPHWMSPEVILQTGHTISTDIWSVACTVIEMATGKPPWSQQYPQEVSALFYIGTTKSHPPIPEHLSAEAKDFLLKCFHKEPDLRPSASELLQHPFITCDYHGSHSVLRSSSRDSCNKMATYGMNSRTFLDSVQGSTCTGLKDVCQIDSIKFSTVYHKADSYQRADNNDDDMCVMDEDDFLIGSPVKSESLLASDDNKSCNSLSKPADDHPCNFNETQYSEKNRPNLSFSSEPPGTEDDEEVTECKIRDFLDAKALELKKLQTPLYEEFFNISNAAIAPTPFAKSKAISGVPNVTSKVRSPSQAWRRFSMIGSASVASPGSHTKYRSKHSGAHCQPLQEIQPPELNESKETLHDAELESSSVSSNFSERQRKWKEELVEELERTREIMRRAGTGGRITSPKDRKFYED 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02662 624 ProSiteProfiles Protein kinase domain profile. 50 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02662 624 MobiDBLite consensus disorder prediction 414 458 - -
Phco6g02662 624 Coils Coil 90 110 - -
Phco6g02662 624 MobiDBLite consensus disorder prediction 602 624 - -
Phco6g02662 624 SMART serkin_6 50 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02662 624 MobiDBLite consensus disorder prediction 414 449 - -
Phco6g02662 624 Pfam Protein kinase domain 51 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02662 624 MobiDBLite consensus disorder prediction 567 588 - -
Phco6g02662 624 Gene3D Transferase(Phosphotransferase) domain 1 49 344 - -
Phco6g02662 624 FunFam Mitogen-activated protein kinase kinase kinase 2 49 341 - -
Phco6g02662 624 SUPERFAMILY Protein kinase-like (PK-like) 49 314 IPR011009 -
Phco6g02662 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Phco6g02662 624 FunFam Serine/threonine-protein kinase STE11 47 140 - -
Phco6g02662 624 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Phco6g02662 624 CDD STKc_MAPKKK 49 313 - -
Phco6g02662 624 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 45 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02662 Phco-Chr6 48260349 48274904 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phco6g02662 Pkinase 2e-70 CL0016