Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02624 ATGAATGGTGTTGCATGTGTTGAGGCAGAGTGCTGTGAGTTTGTGGAAGTTGATCCCACAGGAAGATATGGAAGATACAATGAAATTCTCGGCAAAGGAGCTTCCAAGACAGTCTACAGAGCATTTGATGAGTATGAAGGGATAGAAGTAGCATGGAATCAAGTAAAGCTTTATGACTTTTTGCAGAATCCTGAAGATCTTGAGAGGTTATACAGTGAAATCCATCTTCTCAAGACATTGAAACACAAGAACATCATGAAGTTCTATACTTCCTGGGTTGATACTGCCAACAGACACATTAACTTTGTCACTGAGATGTTCACCTCTGGGACTCTAAGACAGTACAGACTTAAGCACAGACGGGTTAACATCAGAGCTGTTAAGCATTGGTGTAGGCAGATTTTGGAAGGGCTTCTGTATCTGCACAGCCATGATCCTCCTGTGATCCATAGAGATCTCAAGTGTGATAACATTTTCATCAATGGCAACCAAGGGGAAGTCAAAATCGGTGATCTTGGCCTTGCTGCGATTCTCCGCAAATCTAATGCTGCTCGTTGTGTTGGCACACCTGAGTTTATGGCTCCGGAAGTGTATGAAGAGGATTACAATGAGTTGGTTGACATATACTCTTTTGGAATGTGCATCTTAGAGATGGTCACTTTTGAATATCCTTACAGTGAATGCAGCCATCCCGCTCAAATTTACAAGAAAGTTGTATCTGGGAAGAAACCAGAAGCTCTTTACAAAGTAGCCAATCCCGAGGTAAGGCAGTTTGTAGAGAAATGCTTAGCAACTGCGTCCCTCAGACTTTCAGCTAAGGAACTCTTGGAGGATCCTTTTCTACAAATTGATGATTATGGATTTGACTCCAAAGTAGTGCAGTATCAAAGAGATTGCTATGAAGTAACCCCATTAATCAGACAGTCTTTGAATGGAATTTATAGCATTAACAACACCTCAATGAGTGGGTACCCTGATAATCTTGGTGGTTATGGACCCTTATCTGAATTGGATTATCATCAAGACGATTTTGAATCAAGTGAAATCGGTCTCTTTGATTGTGAAGAGGATGACAATTTTGCTAAGGTTAACACCACAATCAAAAGTAGAAGAAGAGAAGATGATGGCATCTTTTTGAGACTCAGAATAGCAGATAAGGAAGGTAGAATTCGAAACATCTACTTCCCATTTGACATTGAGACTGATACTGCATTCAGCGTTGCAAATGAAATGGTAGCTGAGCTTGACATAACTGATCAAGATGTAGCAGATTTAGCAAATATGATAGACAATGAAATTGCAACATTGGTTCCGGAGTGGAGGACAGGAGCAAAAATAGAGGAAAAGTCAGAATGTTCAAGTGCAGGTGTCTGCCTTAATTGTGCTGCAAACGGTTACTTGTTTGATTATGTATCATCAAATAATCCATGTGGCATGAACCTTCAATTTCTTCGTTGTTCTAAAAATGGATGTGCTGCAATTCATGGCCGATTTGAAGAGATAACGTACCAAGTTGAAGGGTCTGCAAGTTGTGGTACCGAAGGTGCACCGGATGCATCAATCCGTTCCGATGGCATTCATTATACAGATATTTGGGCTCAGAGAGATGAACCAGAGTTATACCATGAAGAGTTAAAGGACATACACTGTGACCAAACTCACGAGGTAACAAATCCGTTGAACATCAAGGAGGAAGGAAAAACTGTTAATGTGTATGGAGAAAGTGATTTCATTGCCAAAAAGCCTCATTCAAACCCTGCACCAAATTGTGTTATGTTGGATTATGAAAATGAAATTAGGCAAGAACTAAGATGGCTCAAAGCAAAGTACCAAATGCAGTTAAGGGAGCTTAGAGACCAACAACTGGGGGTGAAGCCAAAATTTATTTGCATATCTCCTGACACGGAAAAATTAAATTGTGGGAAAGATGGAATTCAGAGGTTATCAGCTACATCCAAATTGAAGACAGTAAAGCATAAACCACAATTGAGATCTATAGTTTCCGGGAAGCATTTTCCTGTTGAAGACGAGAAATGCAACAATTATGCTGATCAAATGGTTCAAAATGTTGATGAGATTAGTCAGTCTAACAGTCCTGAGCGAATGCTCACAGCCAAGGATTTCTTTACAGGAGCTTTCTTTCCACACTCACTTCAGAGGGCAACCTCTCTTCCTGTTGATGCAATAGATTTCTAG 2196 0.403 MNGVACVEAECCEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQNPEDLERLYSEIHLLKTLKHKNIMKFYTSWVDTANRHINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILEGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAARCVGTPEFMAPEVYEEDYNELVDIYSFGMCILEMVTFEYPYSECSHPAQIYKKVVSGKKPEALYKVANPEVRQFVEKCLATASLRLSAKELLEDPFLQIDDYGFDSKVVQYQRDCYEVTPLIRQSLNGIYSINNTSMSGYPDNLGGYGPLSELDYHQDDFESSEIGLFDCEEDDNFAKVNTTIKSRRREDDGIFLRLRIADKEGRIRNIYFPFDIETDTAFSVANEMVAELDITDQDVADLANMIDNEIATLVPEWRTGAKIEEKSECSSAGVCLNCAANGYLFDYVSSNNPCGMNLQFLRCSKNGCAAIHGRFEEITYQVEGSASCGTEGAPDASIRSDGIHYTDIWAQRDEPELYHEELKDIHCDQTHEVTNPLNIKEEGKTVNVYGESDFIAKKPHSNPAPNCVMLDYENEIRQELRWLKAKYQMQLRELRDQQLGVKPKFICISPDTEKLNCGKDGIQRLSATSKLKTVKHKPQLRSIVSGKHFPVEDEKCNNYADQMVQNVDEISQSNSPERMLTAKDFFTGAFFPHSLQRATSLPVDAIDF 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02624 731 FunFam Probable serine/threonine-protein kinase WNK1 8 105 - -
Phco6g02624 731 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02624 731 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02624 731 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02624 731 Coils Coil 600 620 - -
Phco6g02624 731 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Phco6g02624 731 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Phco6g02624 731 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 451 - -
Phco6g02624 731 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 433 IPR024678 GO:0004674|GO:0005524
Phco6g02624 731 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Phco6g02624 731 Gene3D - 376 463 - -
Phco6g02624 731 CDD STKc_WNK 22 281 - -
Phco6g02624 731 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Phco6g02624 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Phco6g02624 731 FunFam probable serine/threonine-protein kinase WNK9 375 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02624 Phco-Chr6 47920883 47923867 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Phco6g02624 Pkinase 3e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02624 6 47920883 47923867 Phco6g02624 6 47920883 47923867 ECH