Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02615 ATGCCCAGCCTGTTCTCCAAACACCTTCACCTCTGTTTCTTCAAGCTCAAATACCCCACCATTCTCCACCACCCTCACCCTCCACCGTCCACCGACAACTCCACCACCTTCACCCACCCCTCTTCCGACGACGACACTTCCTCCTCCACGGAGCCTGACTTCGCCTCCGTCTTCGCCTCCCAACGCTTCTTCTTCTCCTCCCCGGGCACCTCCAACTCCATCGTGGAGTCCCCTGACACCCGCACCTTCGTTCACACCAGCGGCGGCGTCACAGTCCCCAAGTATTCCCTTAACCCCTACGTGGATTTCCTCCGCTCAATGCACGAAATGATACGTTCACGCCAAGTCTTAGACATCACCGAGGACTGGGACTACCTCCACGAACTTCTCCTATGCTACCTCGCTGTCAACCCCACTCACACACACAAGTACATCATTCGCGCCTTCACCGACCTTGTCCTCCAACTCCTCTCCTCCACCCCCTGTCGGACGCCCAACCACCACCACCGGCGCCACCGTAGCCTCTCGGGAAACTTCCTCTAA 543 0.582 MPSLFSKHLHLCFFKLKYPTILHHPHPPPSTDNSTTFTHPSSDDDTSSSTEPDFASVFASQRFFFSSPGTSNSIVESPDTRTFVHTSGGVTVPKYSLNPYVDFLRSMHEMIRSRQVLDITEDWDYLHELLLCYLAVNPTHTHKYIIRAFTDLVLQLLSSTPCRTPNHHHRRHRSLSGNFL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02615 180 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 38 157 IPR038933 GO:0045892
Phco6g02615 180 MobiDBLite consensus disorder prediction 25 52 - -
Phco6g02615 180 ProSiteProfiles OVATE domain profile. 92 155 IPR006458 -
Phco6g02615 180 Pfam Transcriptional repressor, ovate 96 156 IPR006458 -
Phco6g02615 180 MobiDBLite consensus disorder prediction 27 52 - -
Phco6g02615 180 NCBIfam uncharacterized plant-specific domain TIGR01568 90 158 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02615 Phco-Chr6 47844619 47845161 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Phco6g02615 Ovate 9.7e-22 No_clan