Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02589 ATGCATTCAGAAAGTGGGGTTTCACGTAAGATGGAATTGGAATCTGGAGTTTTGAATTCAAAGATCAGTAGTGAAAAGCTTAGCAGCAAAAGCATGATTTTCAGTGCTGATAAAATTTATTTGAGGAGTTTGGATGTCATGCTAGAAAAACACTTGAGCAGGATTTTTTCCAAAAGCGCTGCTGCAAAAAGGCCTAAAGAAGCATGGGAGATTGATTTGGCCAAGTTGGATTTACATTATTCTGTAGCTAATGGGACCTATGGTACTGTCTACAGGGGTACTTATGATAGCCAAGATGTTGCAGTGAAAGTCCTGGACTGGGGTGAAGATGGTGTTGCACCTGCTGCTAAAATTGCCTCATTACGGGCATCATTTTGGCAGGAGGTAACTATATGGCAAAAGCTTGATCATCCAAATGTCACAAAATTTATTGGAGCTTCAATGGCCACTTCAAATCTCATGATTCCCTTACCAACCTATGGTCAAAATTCTATTCCTTCCAAGACGTGTTTTGTAATTGCTGAGTTTCTTCCTGGTGGAACATTGAAACAATACTTGTCTAGAAATAGGCAGAACAAACTTCCATACGAGGTTGTAATTCAGCTGGCTTTGGACCTCTCTAGAGGTCTTAGTTATCTACATTCAAAGAAAATCGTTCACCGCGATGTAAAACCTGATAATATGTTGTTAGATGCTAATAAAAATTTGAAAATAGCTGATTTTGGAGTTGCTCGTATTGAAGCTATCAACCAAAGTGAGATGACAAGTGAAACTGGAACCTATGGATATATGGCACCAGAGGTTTTAAATGGCAAGCCTTACAACAGAAAATGTGATGTCTATAGTTTTGGCATTTGCTTGTGGGAAATTTATTGCTGTAATGTACCGTTTTCAAAGCTGAGCCTTGCTACAGTGTCATGTGCAGTTATTAATCAGCATTTACGACCTGATATTCCTAGAAGTTGGCCAAGTGCCTTAGCAAACATCATACGAAAATGCTGGGATGCAAAACCAGAGAGGCGTCCAGAAATGCATGAGGTGGTGGAAATGTTGGAAGCAATTGACACAAGCAAAGGAGGTGGAATGATACGGAAAGATAAAAATCCACGTTTTTTTTGTTTTTTACCTTCTCCTTGTTCCTAG 1143 0.3937 MHSESGVSRKMELESGVLNSKISSEKLSSKSMIFSADKIYLRSLDVMLEKHLSRIFSKSAAAKRPKEAWEIDLAKLDLHYSVANGTYGTVYRGTYDSQDVAVKVLDWGEDGVAPAAKIASLRASFWQEVTIWQKLDHPNVTKFIGASMATSNLMIPLPTYGQNSIPSKTCFVIAEFLPGGTLKQYLSRNRQNKLPYEVVIQLALDLSRGLSYLHSKKIVHRDVKPDNMLLDANKNLKIADFGVARIEAINQSEMTSETGTYGYMAPEVLNGKPYNRKCDVYSFGICLWEIYCCNVPFSKLSLATVSCAVINQHLRPDIPRSWPSALANIIRKCWDAKPERRPEMHEVVEMLEAIDTSKGGGMIRKDKNPRFFCFLPSPCS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02589 380 SUPERFAMILY Protein kinase-like (PK-like) 62 351 IPR011009 -
Phco6g02589 380 ProSiteProfiles Protein kinase domain profile. 76 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02589 380 FunFam Kinase suppressor of Ras 1 65 159 - -
Phco6g02589 380 CDD STKc_MAP3K-like 85 351 - -
Phco6g02589 380 Pfam Protein tyrosine and serine/threonine kinase 78 351 IPR001245 GO:0004672|GO:0006468
Phco6g02589 380 PRINTS Tyrosine kinase catalytic domain signature 174 187 IPR001245 GO:0004672|GO:0006468
Phco6g02589 380 PRINTS Tyrosine kinase catalytic domain signature 212 230 IPR001245 GO:0004672|GO:0006468
Phco6g02589 380 PRINTS Tyrosine kinase catalytic domain signature 322 344 IPR001245 GO:0004672|GO:0006468
Phco6g02589 380 PRINTS Tyrosine kinase catalytic domain signature 278 300 IPR001245 GO:0004672|GO:0006468
Phco6g02589 380 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 59 355 - -
Phco6g02589 380 Gene3D Transferase(Phosphotransferase) domain 1 179 368 - -
Phco6g02589 380 Gene3D Phosphorylase Kinase; domain 1 65 157 - -
Phco6g02589 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Phco6g02589 380 SMART serkin_6 76 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02589 Phco-Chr6 47528380 47530617 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phco6g02589 PK_Tyr_Ser-Thr 1.2e-56 CL0016