Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02562 ATGGCCTCTAAAAACGAAAGCGATAATTCAACCGATACTTCTCCATCATCGCCAAAGAACATATACAAAGATCCAGATGATGGGCGGCAACGATTTTTACTTGAATTGGAGTTTGTTCAGTGCCTTGCTAATCCTACCTACATCCACTATTTGGCTCAGAATCGATATTTTGAGGATGAAGCATTCATTGGATACTTAAAGTATCTTCAATATTGGCAGCGCCCTGAATATATTAAATTTATTATGTATCCTCATTGTCTTTATTTTCTTGAGCTGCTTCAGAATGCAAATTTTCGCAATGCAATGGCACATCCTACCAATAAGGAGCTGGCACATAGACAACAATTCTACTTCTGGAAGAACTATAGGAACAATCGGCTAAAACACATTTTACCAAGATCACTTCCGGAGCCTAGTGCCACATCTGCAGTTCCTGCTCCCGTTTCAACTACAACTCAGGCACCTGTATCTGCACTGCCACCAGTACCTGCTACAAGCGTTGCTGTGACATCAACACCTACTCAAGCTCCTTCTCCTATGTCATATGGTATGCCCCCTGGCTCTGGTCTAGCTAAAAATGACATGAGGAATCCTACAGTTGACAATAGAAGGAAGAGAAATCCATCGCTAATTGGAAATTTTGGGGTCATCAGAACGGGAAAGGAGTTTGCTAGCCTTGTCATTGCTTCTCATATTTGA 699 0.4163 MASKNESDNSTDTSPSSPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPTNKELAHRQQFYFWKNYRNNRLKHILPRSLPEPSATSAVPAPVSTTTQAPVSALPPVPATSVAVTSTPTQAPSPMSYGMPPGSGLAKNDMRNPTVDNRRKRNPSLIGNFGVIRTGKEFASLVIASHI 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02562 232 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 1 206 IPR008831 GO:0003712|GO:0006355|GO:0016592
Phco6g02562 232 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 17 119 IPR038089 -
Phco6g02562 232 MobiDBLite consensus disorder prediction 1 20 - -
Phco6g02562 232 Pfam SOH1 30 122 IPR008831 GO:0003712|GO:0006355|GO:0016592
Phco6g02562 232 FunFam Mediator of RNA polymerase II transcription subunit 31 18 119 - -
Phco6g02562 232 MobiDBLite consensus disorder prediction 168 208 - -
Phco6g02562 232 MobiDBLite consensus disorder prediction 1 24 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Phco6g02562 Med31 2.2e-35 No_clan