Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02549 ATGCCATCTCGACAACTCTCCACGTCGCCACCACCTTCTAACCACCGCCTCTTAACCCCTCCGGTCACTTCCACCGCCTCCGTTTGCTCCTTTCTCTTTTTACTTTGCCTCTGCTTCCGCAAGCGTAAACGCACCACCCCTTCCTCCGACTCCGACTCCACTCCCCCTCACCCTTTCTCCTACCCCCTCCTCCGCCGCGCCACCAATTCCTTCTCCACGCGCCTTGGCCACGGTGGCTTCGGCCCCGTCTTCGCCGGCACCCTCGCCGGCGACCCCGTCGCCGTCAAGCTCATGGACTCCGCCTCCCAGCAGGGAGAGCGCGAGTTCCACAACGAGCTCTTCTTCGCGTCCAGGCTCCGGTCCCCTTCTCTGGTCCCCGCCATCGGCTTCTCCTCCGACCCCAAACGCCGGCGTTTCCTCCTCGTCTACCACCTCATGCACAACGGCAACCTCCACGACGCCCTCTTGCGCTGCAAAACCCCTCACCTGAAGAGCTGGAATAACCGCTTCTCCATTATCCTCGACATCGCCAAAGGCATCCACTACCTCCACTCGCTCGACCCCCCTGTCATCCACGGCGACATCAAACCCTCCAACATTCTCCTCGACAACTCCTTCTCTGCCAAACTCGCCGACTTCGGCCTTGCGCGATTAAAATCCCATGTCCAAGAGTTAAAAGAAAAATGCGACGAGAAGAGAAGGGACGAGTCCGAGAGCGATTGTGGGTCGGAGTTAGAAACTCAGAGCGTCAACACAGAGAAATCGTTTGAAGGTAACACCGGGTCGGATTATGTGATAGATTGGATCGGGAAGGAGTTGAAGAAGGAAAGGCCGACGGCGGTGAAGAAGGGTTCTTCTGGGTCGAGCAGTGGAGTAGCGGAGAAGAAGAAAAGTAGAAAGAAATCGGAGTGGTGGGAGACGATGGATGACAGTGGAGTTTCGAAGAAGGAGAAGAGAAGGGCAGCGAGGGAATGGTGGAAGGAGGAGTATTCAGAAGAGCTTGCGAGAAAGACGAAGAAAAAGAAAAAGAAGGAGAAGAGAAAGAGAAAGGGTAGTAACGGTGAGGGTGATTTGAAGATAGATGATGGTGTAGATTCGTGGTTGAGTGGGGATGTACATGGAGTTAGATGGAACAGCTACGATTCTGGGACTTGTAGTGGAGAAATAGTAGCCAAGAGTGGTGGTGTGAGTAGTAGTCCGAGTATGAGGGGAACGGTTTTCTACGTGGCTCCTGAGTATGGCTTCAATGGGGATGTTTCTGAGAAGTGTGACGTGTACAGTTTCGGGGTTTTATTGCTTGTTATTGTTTCCGGCAGAAGGCCACTTCAGGTGACAGGGTCGCCTATGTCGGAATTTAAGCGTGCGAATCTGGTGTCTTGGGCGAGGCAATGTGGGCGGAGAGGGAAGCTTCTAGAAGTGGTGGATGAGGGTGTTGAGGGGTTGGACGAAGAGCAGGCTAGTCTGTGCGTGAGGGTTGCGCTCGCTTGTTTGCTCAAGTCACCCGCTCGTCGTCCTTCCATGAAGGAGGTTCTGGGAATGCTGAGTGGCGAGCTGGAGCCTCCGCTGTTGCCGCGCAATACTTTCCCCCTCAACTCCAGGACCCAAGGTCGGTGA 1614 0.5508 MPSRQLSTSPPPSNHRLLTPPVTSTASVCSFLFLLCLCFRKRKRTTPSSDSDSTPPHPFSYPLLRRATNSFSTRLGHGGFGPVFAGTLAGDPVAVKLMDSASQQGEREFHNELFFASRLRSPSLVPAIGFSSDPKRRRFLLVYHLMHNGNLHDALLRCKTPHLKSWNNRFSIILDIAKGIHYLHSLDPPVIHGDIKPSNILLDNSFSAKLADFGLARLKSHVQELKEKCDEKRRDESESDCGSELETQSVNTEKSFEGNTGSDYVIDWIGKELKKERPTAVKKGSSGSSSGVAEKKKSRKKSEWWETMDDSGVSKKEKRRAAREWWKEEYSEELARKTKKKKKKEKRKRKGSNGEGDLKIDDGVDSWLSGDVHGVRWNSYDSGTCSGEIVAKSGGVSSSPSMRGTVFYVAPEYGFNGDVSEKCDVYSFGVLLLVIVSGRRPLQVTGSPMSEFKRANLVSWARQCGRRGKLLEVVDEGVEGLDEEQASLCVRVALACLLKSPARRPSMKEVLGMLSGELEPPLLPRNTFPLNSRTQGR 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02549 537 SUPERFAMILY Protein kinase-like (PK-like) 53 527 IPR011009 -
Phco6g02549 537 Coils Coil 327 347 - -
Phco6g02549 537 Pfam Protein tyrosine and serine/threonine kinase 399 511 IPR001245 GO:0004672|GO:0006468
Phco6g02549 537 Pfam Protein tyrosine and serine/threonine kinase 71 229 IPR001245 GO:0004672|GO:0006468
Phco6g02549 537 MobiDBLite consensus disorder prediction 277 318 - -
Phco6g02549 537 MobiDBLite consensus disorder prediction 227 257 - -
Phco6g02549 537 Coils Coil 215 235 - -
Phco6g02549 537 ProSiteProfiles Protein kinase domain profile. 69 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02549 537 MobiDBLite consensus disorder prediction 336 356 - -
Phco6g02549 537 SMART serkin_6 69 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02549 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Phco6g02549 537 Gene3D Transferase(Phosphotransferase) domain 1 381 520 - -
Phco6g02549 537 PANTHER OS07G0586332 PROTEIN 258 353 IPR044576 -
Phco6g02549 537 MobiDBLite consensus disorder prediction 243 257 - -
Phco6g02549 537 MobiDBLite consensus disorder prediction 293 318 - -
Phco6g02549 537 MobiDBLite consensus disorder prediction 227 241 - -
Phco6g02549 537 Gene3D Transferase(Phosphotransferase) domain 1 54 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02549 Phco-Chr6 47045868 47047481 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Phco6g02549 PK_Tyr_Ser-Thr 8.2e-25 CL0016