Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02531 ATGGAATCAAATCCCACCCATGACGGGGATGACACCTCGGAGAAGCCGTCACCGACAATGGTGGAGCCGACGGAATCGTCGTCACCCTCTCTGTCTCCGTCGCAGGCGCTACAAATGAAAGAAGAGGCCATGGACGTGGAGCAAGGTGTTGACGTATCCCTTCCAATGAACGTTATTCCGATGCCTCTGACGGTGGCAAAGCGGCCGTCGAAGGACCGACACACGAAGGTGGAGGGGCGCGGCCGCAGAATCCGGATGCCGGCGACATGCGCCGCGAGGATCTTCCAGCTCACGCGCGAGCTGGGGCACAAGTCTGACGGAGAAACAATCCGGTGGCTGCTGGAGCACGCTGAGCCGGCTATCATCGAGGCCACCGGCACGGGCACAGTTCCGGCCATCGCGGTGTCTGTCGGCGGAACTCTGAAGATTCCGACATCCTCGGCGGCGAGGCCGGACGGAGAAGAAACCCCAAAGAAGCGAAGGAGGCGAGCGTCAAATAGCGAATTCATCGACGTGAACGAAAACCACGTTTCGGTGTCTTCAGGGCTCGCACCGATCGCGCAAACAGCATATGGCGGTGTTGCCAGTGGCGGTGGTGGTGGAGTAGTTCCCCTCTGGAATGGTAACGCTTCAGGGCCTTTCTTCATGTTCCCAAACGCTTCAAACCCGCCTCAGTATTGGGCCATTCCCGCAACCGCGGCCCCATTTTTTAACGTGCAGGCCCGGCCCATTTCGGGGTTCGTTTCCGCCTTGCAGATGCATGAACAGGATAAGCACTCCTCAGATGGTGGTGCCCCGGATTCTGTTAACTCTTCCTCCACTATGGGTTCTAGTATGAGCTCAGTGAGTGTTACTACTGCTGCTGCTTCCTCCTCATCCGCCGCCACAACCACTCAAATACTCAGGGATTTCTCTTTGGAAATTTATGACAAGAAAGAGCTTCAATTTTTGGGGCAAGCGCCACCTTCTTCAAAGCCCTGA 981 0.5698 MESNPTHDGDDTSEKPSPTMVEPTESSSPSLSPSQALQMKEEAMDVEQGVDVSLPMNVIPMPLTVAKRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTSSAARPDGEETPKKRRRRASNSEFIDVNENHVSVSSGLAPIAQTAYGGVASGGGGGVVPLWNGNASGPFFMFPNASNPPQYWAIPATAAPFFNVQARPISGFVSALQMHEQDKHSSDGGAPDSVNSSSTMGSSMSSVSVTTAAASSSSAATTTQILRDFSLEIYDKKELQFLGQAPPSSKP 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02531 326 MobiDBLite consensus disorder prediction 152 166 - -
Phco6g02531 326 MobiDBLite consensus disorder prediction 17 37 - -
Phco6g02531 326 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 46 312 IPR005333 GO:0003700
Phco6g02531 326 MobiDBLite consensus disorder prediction 1 15 - -
Phco6g02531 326 MobiDBLite consensus disorder prediction 263 280 - -
Phco6g02531 326 MobiDBLite consensus disorder prediction 143 166 - -
Phco6g02531 326 MobiDBLite consensus disorder prediction 253 280 - -
Phco6g02531 326 Pfam TCP family transcription factor 70 154 IPR017887 -
Phco6g02531 326 ProSiteProfiles TCP domain profile. 70 124 IPR017887 -
Phco6g02531 326 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02531 Phco-Chr6 46819796 46820776 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phco6g02531 TCP 1.1e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02531 6 46819796 46820776 Phco6g02531 6 46819796 46820776 ECH