Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02491 ATGGGTAAAGCACCTTGTTGTGAGAAACATGGAGTCAAAAGGGGAGCTTGGACTCCTGAAGAAGACCAAGCCTTGGTTGACTACATCAACGAGCATGGTCATGGAAGTTGGCGTACACTTCCCAAACATGCAGGTCTCTTACGGTGTGGAAAAAGCTGTCGGCTTAGGTGGATAAACTATCTTCGCCCTGGCATCAAGCGTGGCCCATTTACCAGTGAAGAAGAAAGTACAATTGTTCAACTCCATGGCATGCTTGGCAACAGGTGGGCTGCTATAGCTTCCCAATTACCTGGAAGAACTGACAATGAGATTAAGAACTATTGGAACACCCATCTAAAGAAGCGTCTCCTTCGATCATGTCATTCCCTAAGAGAAAAACAGTCATGTCTGATTCTGGATCAAACTATTGTCAAGTCTGAATCTCCTTCTACGCGTCACATGGTACAATGGGAAAGTGTAAGAGTTGAGGCAGAGGCAAGATTGTCAATGGAATCCTCGCTGCTCAGTTCATGGACAACGAGCACAACATGCCCTGATCACTTTCTTCATCTTTGGAATTCTGAGGTTGGAAAGTCATTTCGCATGGTCAAGGGAAAGGTTGTGAGTCAAAGTCCTATCTCGCATCTGTCATCCTCATCTAAATTGGAGTCTTGTTCAGACGTGTCAGTGCAGGTGAAAAACAATGGAACTAGTAGCCTCAATCCACGCATTGAGGATGTGAACATGGTTCATGAACAGATAAGTAGCTACAAACCAAAGCTTGATGACACAGCTGGGTCTGACTCAGGCAATTATGAATTTCTTGATACTTCAGATTCTGCACTAAAGCACCTACTACATATGTCTGATGGTGATGTTGGATTCTTGGGACAGAATGATAATTTCTTGAATCTCCTTGATGCTACATGTGATCAAGATAGTTTCTTTCATATCTCTTCTTCAGAGAAAGGCAATCTTTGA 960 0.4344 MGKAPCCEKHGVKRGAWTPEEDQALVDYINEHGHGSWRTLPKHAGLLRCGKSCRLRWINYLRPGIKRGPFTSEEESTIVQLHGMLGNRWAAIASQLPGRTDNEIKNYWNTHLKKRLLRSCHSLREKQSCLILDQTIVKSESPSTRHMVQWESVRVEAEARLSMESSLLSSWTTSTTCPDHFLHLWNSEVGKSFRMVKGKVVSQSPISHLSSSSKLESCSDVSVQVKNNGTSSLNPRIEDVNMVHEQISSYKPKLDDTAGSDSGNYEFLDTSDSALKHLLHMSDGDVGFLGQNDNFLNLLDATCDQDSFFHISSSEKGNL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02491 319 Gene3D - 14 66 - -
Phco6g02491 319 CDD SANT 69 112 IPR001005 -
Phco6g02491 319 FunFam MYB transcription factor 69 116 - -
Phco6g02491 319 CDD SANT 16 61 IPR001005 -
Phco6g02491 319 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phco6g02491 319 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Phco6g02491 319 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Phco6g02491 319 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phco6g02491 319 Gene3D - 69 116 - -
Phco6g02491 319 SMART sant 13 63 IPR001005 -
Phco6g02491 319 SMART sant 66 114 IPR001005 -
Phco6g02491 319 FunFam Myb transcription factor 11 67 - -
Phco6g02491 319 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 245 - -
Phco6g02491 319 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phco6g02491 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phco6g02491 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02491 Phco-Chr6 46329389 46331387 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phco6g02491 Myb_DNA-binding 4.9e-16 CL0123