Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02461 ATGCCAGTTGCAAAACTCCCGGCCTCAGGCACAACCGGTTTCACAAAAACAGACGATGGAAATGATTCTTTAGATACAATATTCAGACAAGCAATTGGAAAAGAACCTTTGCTTTCCTTTCCTAGGGCCGGTGACAGCCCAGTACAGTGGATTCAATTACTTCATGCTTTAGATCAGCAAGAACTTCCAGGGTGGCCTTTGCTCTCTCCTGTGAAGGTTCAGCTACAAAAGTGCAACAAGTGTTCTCGAGAATTTTGCTCTCCCATTAATTATAGAAGACATATACGCGTGCAGCACCGGTTGAAAAAGCTTGATAAGGATTCTAAAAAGAATAGGGAACTTTTAGGGGCATTTTGGGATAAGCTCTCCGTAGAAGAAGCAAAGGAAGTTGTTTCATTCAAGAATGTGATGCTGGAGGAAATTCCAGGGTCTTCCATTTTAGAAGCTTTGACAACTCTTAGAAAACAAGGATTTTCTTCTCTTCCACAGAATTATCTGAGGGCTGGTTCTGCCCTTTTGAATATTGTTCAATCCAGGCCTTCTAGTTTTCCCATATCTTCCCAAGAGTTGTTCAGTATCCTAGATGATTCTAGTGAAAAAACATTTTTGGTCGGATCAGCAGTGTCAATGCAAAGATATGTTTTTGATGGAGAGGCTGGAAAGATTGGTCTTGAACAAAAAAACCTTGTTGCTTGCACAAGTTTCTTGCTAGAGCAGAAACTGGTGAAGGCTTGGCTTGCTGACAAGGATGCTGAAGCATTGAGATGCCAAAAGCTGCTTGTGGAAGAGGAAGAAGCTGCTCAGAAAAGAAAAGCTGATATCTTAGAGAGGAAACGCCAGAAAAAGCTCAGACAGAAAGAACACAAGGCAAAGGAACAAATTGAAGACGACACAGAAACTAAAGGGAACATAAGCAGCGCAGGAGAGGATGTATCTCCAGGAGAAGCATCTCTGGATACATGTGACTTCGATGCACATAATCCAGATATATTTGCTGATCATTCTCCTCCGCCACATGTAACTTCTCACTGCCTAGACACTAATGAAGTTATAGAAGGGTATACACTGTCGGGGTATGATTGTGACACTGATCAGTATACAGATCGGCAGACACTACAAGGACACAATCGCCGGGGCACAATGCCTACTAGATGGCAAGGGCTACCAAAATCGCAATGGGCTAGAGCCAATGGTTTGAATGCAGGCCAGAATTCTCAACCGTCGAAGGTTGGAGTTATTCAAAAACATAGAACCAGTCATGACCTTAGGGTAGCTCCTGTAGTTAATGGCAGTAAGGTTTGGAGTCGAAAACCTAAAGCAGAAACTAATGGTTTGGTTCTAAAAGCCAAACTGCTGAAAGAACCAGACAAAGTTAAAAATCACGAAGTTTTGATAGGATCTGTATCAGTTAGTCTGGGTAATTGCTGCCATTCTGGAGGTAATTTTATGGCACCCCAGCGGGACTGCTTGGCAGGGAATCTGTCCAAGCTGAATACTGCTCCGGAGAAACCAGGAAGCAATGGTCGTTTAACAGTTAAGCTTTGGAGGCCTGTTAGCCAGCATGGAACTAAAGACCCATTTCCACTTCAAAATGGTGGGACAGAAGCTGATGTTATTAATGAAAAATTTGATGAAAATTCGTCTGGTCAAAGTAGTTTAAGGTTGTGTAGTGTAGAGGGTAGTGATATTGATTTTGGGGACAATTTTTCCCATAATGTGGCAAAAGTAGATTCAGAAAGCTTACGTCTATCCAGCCAAGCTGCAAAATCCTTTCTTGCACAAAGATGGAAAGAGGCTATCTCGTCAGACCATGTAAAATTGGTTTTCACACCTGATTCGGAGCCTCGTGGAGAACCGCCGGTACAGGATTGTGAACTAGCAGCAGCTTATCTATCTTCTGACGCGGACAGATGTGGCATTCTTGCAAGTACAGAGAATCGATTGCCTGCAACCTCTGGAGTAGCAAGATCTAAACCTAAAACGAAGCCTGAAAAAGGAATGAAGATAAAGTACATTCCCAAACAAAAAGCAGCAGCCTAG 2040 0.4279 MPVAKLPASGTTGFTKTDDGNDSLDTIFRQAIGKEPLLSFPRAGDSPVQWIQLLHALDQQELPGWPLLSPVKVQLQKCNKCSREFCSPINYRRHIRVQHRLKKLDKDSKKNRELLGAFWDKLSVEEAKEVVSFKNVMLEEIPGSSILEALTTLRKQGFSSLPQNYLRAGSALLNIVQSRPSSFPISSQELFSILDDSSEKTFLVGSAVSMQRYVFDGEAGKIGLEQKNLVACTSFLLEQKLVKAWLADKDAEALRCQKLLVEEEEAAQKRKADILERKRQKKLRQKEHKAKEQIEDDTETKGNISSAGEDVSPGEASLDTCDFDAHNPDIFADHSPPPHVTSHCLDTNEVIEGYTLSGYDCDTDQYTDRQTLQGHNRRGTMPTRWQGLPKSQWARANGLNAGQNSQPSKVGVIQKHRTSHDLRVAPVVNGSKVWSRKPKAETNGLVLKAKLLKEPDKVKNHEVLIGSVSVSLGNCCHSGGNFMAPQRDCLAGNLSKLNTAPEKPGSNGRLTVKLWRPVSQHGTKDPFPLQNGGTEADVINEKFDENSSGQSSLRLCSVEGSDIDFGDNFSHNVAKVDSESLRLSSQAAKSFLAQRWKEAISSDHVKLVFTPDSEPRGEPPVQDCELAAAYLSSDADRCGILASTENRLPATSGVARSKPKTKPEKGMKIKYIPKQKAAA 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02461 679 ProSitePatterns Zinc finger C2H2 type domain signature. 78 99 IPR013087 -
Phco6g02461 679 MobiDBLite consensus disorder prediction 287 303 - -
Phco6g02461 679 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 677 - -
Phco6g02461 679 MobiDBLite consensus disorder prediction 649 679 - -
Phco6g02461 679 MobiDBLite consensus disorder prediction 278 316 - -
Phco6g02461 679 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 104 IPR013087 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco6g02461 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02461 6 46000953 46006161 Phco6g02461 6 46000953 46006161 ECH