Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02457 ATGATAGATTTTTTAACTATTACTGAGATCCTTTTAAGAAATTTGCTTGCCACATTTCAATTTATAAAGACAAATATGCTTACATGGTGGGGAAAATCATCATCAAAAGAAAGCAAGAAGAAATCAAATAAGGAAAGCTTTTTTGACACACTGCACCGGAAATTTAAAATTTCATCTGAAGGTAAACTAAGCACTAGATCTGGAGGATCCCGTAGACATCGCAATGACACAGTTTCAGAGAAGGGGGATCCTTCTCCAACTGAATCAAGATCACCTTCACCTTCCAAAGTGGCTAGGTGTCAAAGTTTTATTGAAAGACCTCATGCTCAGCCACTTCCTCTTCCTGGTCTGCACCCTTCAAGTGTTGGCCGAGTAGATTCTGAAATTAGCATATCATCAAAATCAAGATTGGAAAAAGGCTCCAAGCCATCATCGTTTCTTCCTCTTCCAACACCTGGATGCATACGTTGTAAGCCAAACCCTGCAGATTTGGATGGAGATATGGTCACAGCTTCAGTCTTTAGTGATTGCTCTGCTGACAGTGATGAGCCACACTCACACAATCGAAGTCCTCTAGTGGCTGACTGTGAGACTGGGACTAGAACTGCTGCTGCTGGCAGTCCTTCCAGCACGATGCTCAAGGATCAGCCAATTGTCGTTTCCCAGCTCAATTCAGCAGGAGTAAAAAAATCAGGAAGTATTCTAAGTAGTCATACATCTTCTACATCACCAAAACGTAGGCCTTTACGCAACCATGTTCCAAATCTTCAGGTTCCTCCTCATGGTGCCTTCTACAGTGCTCCTGATAGTTCCTTGTCAAGTCCATCAAGAAGTCCATTGAGAGCATTTGGCACAGATCAGGTTTTGAATTCTGCTTTTTGGTCTGGAAAGCCATATTCAGAGGTCAACTTGCTTGGATCTGGACAATGCTCTAGTCCTGGTTCAGGTCACAATTCTGGACATAATTCAATGGGAGGGGACATGTCAGGACCTTTATTTTGGCAACCAAGCAGGGGTAGTCCTGAGTATTCTCCAGTACCTAGTCCCAGAATGGCTAGTCCTGGTCCTAGCTCTAGAATTCAGAGTGGAGCAGTCACACCTATTCATCCCAAAGCTGGGGGAACACCCATTGAATCACAGACAGGAAGGGTTGATGATGGAAAACAGCAGACACATCGTTTGCCGCTTCCTCCTTTGTCAGTCTCCAATTCCTCACCATTCTCCCATTCAAATTCAGCAGCAACTTCTCCGTCTATGCCAAGAAGTCCGGCTAGAGCAGATACTCCAGGCTCTGGCTCACGTTGGAAGAAAGGAAAGCTGCTAGGTAGTGGCTCATTTGGACATGTCTATCTTGGCTTCAATAGTGAAAGTGGTGAAATGTGTGCAGTGAAGGAGGTTACCCTCTTTGCAGATGATCCCAAGTCAATGGAAAGTGCTAAGCAATTTATGCAGGAAATTCATTTATTAAGCCGTTTACAGCATCCAAATATTGTCCAGTATTATGGTTCTGAAACAGTTGATGACAAGCTTTACATATACCTTGAATATGTATCTGGAGGCTCCATACACAAACTTCTTCGAGAATATGGGCAGTTTGGTGAACTAGTTATTCGTAGCTATACTCAACAAATTTTGTCAGGGCTTGCTTATTTGCATGCTAAAAATACTCTCCATCGGGACATCAAAGGAGCAAATATACTGGTAGATCCAACTGGTCGGGTCAAGTTGGCAGACTTTGGCATGGCAAAACATATAACTGGGCAATCGTGTCCATTATCATTCAAAGGAACCCCTTACTGGATGGCTCCTGAGGTTATAAAGAACTCTAATGGATGCAATCTCGCCGTAGATATATGGAGTCTTGGATGCACAGTTTTGGAAATGGCTACTACCAAACCTCCTTGGTTTCAGTATGAAGGGGTTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCGACAATCCCTGATCATCTCTCAAATGAAGGAAAAGATTTTGTTAGGAAATGTCTTCAGCGTAACCCATATGATCGCCCTTCAGCCAGTGAATTATTGGACCACCCTTTTTTAAAACTTGCTGCACCTTTGGAAAGACCTATTCTGGTTACTGAAGCATTGGACCCTATTTCTGGGACTACACAAGGGGCAAAAGCTCTGGCCATTGGACAAGCAAAGAATCTTTCTACCTTGGATTCAGATAGACTTTCTGTTCATTCTTCAAGATTTTTGAAAATTAATCCCCATGAAAGTGAAATCCATATTCCTAGGAATATATCTTGCCCCGTCTCTCCCATTGGAAGTCCACTTTTGAGGTCAAGATCACCGCAGCACAGGAATGGGAGAATGTCTCCTTCTCCTATATCCAGCCCCCGGACTGCTTCTGGGGCATCAACACCTCTCGCTGGTGGCAGTGGTGCCATTCCGTTTGGTAATCACTCTAAACAGTTAATTTACTTTCAAGAGGGTTTTGGAAGCATCCCTAAGTCCTCAAATGGTATGTACGTTAATGGCCCTGCTCATCATGACTCAACTGTTGACATTTTTCGAGGAATGCAAATAGGGTCTCACATTCCACCAGAGCTGGTTTCCAGTGAAAATGATGTTCTGGTTAAGCAGTTTGCAAGGCATCCTCATGCAGAGCCACACGATTTTCAGTCAGTCTTGGCAGATCGTGTTGGCCGGCAGCTGCTGCGGGAACATGTTAAGATTAACCCATCCCTTGATCTCAGCCCCAGCTCATCTTTGCTTAGCCGCCCAAATGGTTTATAA 2772 0.4383 MIDFLTITEILLRNLLATFQFIKTNMLTWWGKSSSKESKKKSNKESFFDTLHRKFKISSEGKLSTRSGGSRRHRNDTVSEKGDPSPTESRSPSPSKVARCQSFIERPHAQPLPLPGLHPSSVGRVDSEISISSKSRLEKGSKPSSFLPLPTPGCIRCKPNPADLDGDMVTASVFSDCSADSDEPHSHNRSPLVADCETGTRTAAAGSPSSTMLKDQPIVVSQLNSAGVKKSGSILSSHTSSTSPKRRPLRNHVPNLQVPPHGAFYSAPDSSLSSPSRSPLRAFGTDQVLNSAFWSGKPYSEVNLLGSGQCSSPGSGHNSGHNSMGGDMSGPLFWQPSRGSPEYSPVPSPRMASPGPSSRIQSGAVTPIHPKAGGTPIESQTGRVDDGKQQTHRLPLPPLSVSNSSPFSHSNSAATSPSMPRSPARADTPGSGSRWKKGKLLGSGSFGHVYLGFNSESGEMCAVKEVTLFADDPKSMESAKQFMQEIHLLSRLQHPNIVQYYGSETVDDKLYIYLEYVSGGSIHKLLREYGQFGELVIRSYTQQILSGLAYLHAKNTLHRDIKGANILVDPTGRVKLADFGMAKHITGQSCPLSFKGTPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWFQYEGVAAMFKIGNSKELPTIPDHLSNEGKDFVRKCLQRNPYDRPSASELLDHPFLKLAAPLERPILVTEALDPISGTTQGAKALAIGQAKNLSTLDSDRLSVHSSRFLKINPHESEIHIPRNISCPVSPIGSPLLRSRSPQHRNGRMSPSPISSPRTASGASTPLAGGSGAIPFGNHSKQLIYFQEGFGSIPKSSNGMYVNGPAHHDSTVDIFRGMQIGSHIPPELVSSENDVLVKQFARHPHAEPHDFQSVLADRVGRQLLREHVKINPSLDLSPSSSLLSRPNGL 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02457 923 ProSiteProfiles Protein kinase domain profile. 435 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02457 923 MobiDBLite consensus disorder prediction 59 98 - -
Phco6g02457 923 MobiDBLite consensus disorder prediction 59 83 - -
Phco6g02457 923 MobiDBLite consensus disorder prediction 766 806 - -
Phco6g02457 923 ProSitePatterns Protein kinases ATP-binding region signature. 441 464 IPR017441 GO:0005524
Phco6g02457 923 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 59 700 - -
Phco6g02457 923 MobiDBLite consensus disorder prediction 132 152 - -
Phco6g02457 923 MobiDBLite consensus disorder prediction 229 248 - -
Phco6g02457 923 MobiDBLite consensus disorder prediction 395 422 - -
Phco6g02457 923 FunFam Mitogen-activated protein kinase kinase kinase 433 715 - -
Phco6g02457 923 MobiDBLite consensus disorder prediction 229 279 - -
Phco6g02457 923 CDD STKc_MEKK1_plant 434 691 - -
Phco6g02457 923 MobiDBLite consensus disorder prediction 310 437 - -
Phco6g02457 923 SUPERFAMILY Protein kinase-like (PK-like) 433 766 IPR011009 -
Phco6g02457 923 MobiDBLite consensus disorder prediction 310 325 - -
Phco6g02457 923 SMART serkin_6 435 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02457 923 Gene3D Transferase(Phosphotransferase) domain 1 432 712 - -
Phco6g02457 923 Pfam Protein kinase domain 436 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02457 923 MobiDBLite consensus disorder prediction 770 800 - -
Phco6g02457 923 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02457 Phco-Chr6 45970960 45977111 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phco6g02457 Pkinase 3.9e-73 CL0016