Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02404 ATGGCCATTACTGCTGCCTCTTCCTTTTCATGTTTTTGTCTAATTCTTGCTTTTGCCCTCTCTTCTTTTAGACCCTGCATTTCGGCCCACATTGGGTTGGGCTCCAAGTTATTGTCTAGCAAGGCCCAAACTTGGCTTTCGGAAAATGGCACATTTGCTTTGGGGTTCACTCCTGCAGATAGTGATAATCGATTGTTTGAGCTTGGTGTTTGGTTTGCACAGCTTCCAGGAGATCCAACTCTAGTTTGGTCACCCAATAGAGATACTCCTGTATCCCAAGATGCAATATTGGAGCTTGACACCACTGGCAACCTTGTTCTCATGGATGGAGACATCACAGTGTGGACCTCAAACACCTCAGGTGCTGGTGTAAAAGCAGCAGTCATGGCAGAATCTGGCAACTTCATCCTCCACAACGCCACCAACCACCCAGTGTGGCAGAGTTTTTCTCAACCTTCCGACACTCTCCTCCCCAACCAGCTTCTAACAGTGTCTTCAGAACTAACTTCATCAAAGTCTTCCTCTCATGGTGGTTACTATTCTCTCAAAATGCTTCAACAGCGTACTTCCTTAAGCCTTGCTCTCACTTACAATCTTCTTGAGACTTACCAAGCCTCAGATGAATCATACACTAACTATTCCTATTGGAAAGGCCCTGATATCTCCAATGTGACTGGGGAGGTTATAGCAGTTTTAGACCATGCTGGGAGCTTTGGGATTGTGTATGGAGACTCATCTGATGGAGCAGTATATGTGTACAAGAATGATGGTGACGATGCAGGCTTGCCTTCTGCAGTCCATCAGTCTGCATCATCAACTGTTCTCAGGAGACTAACACTGGAGAAGAATGGCAATCTGCGGTTGTATCGATGGGACGAAGTGAATGGCTCAAGGCAGTGGATGCCACAGTGGGCTGCAGTTTCAAATCCATGTGACATTGCTGGAGTTTGTGGCAATGGGGTTTGCAATTTGGATAGAAGTAAGACAAGAGCCACTTGCACTTGCTTGCCAGGAACTTCTAAAGTTGGGAGGGATGGGCAGTGCTATGAGAATTCATCTCTTGTGGGAAAATGCAATGAGAAGGATGAAAACCTGACATCCCAGTTTAGGATTTCGACGGTGCAGCAAACCAACTATTATTTTTCTGACATTTCAGTTATAGCTAACTACAGTGATACTAATGTGTCAAAATGTGGGGATGCTTGCTTGTCAGAATGTGATTGTGTGGCTTCTGTTTATGGGCTAAATGAGGAGAGACCATATTGTTGGGTGTTGAGGAGCTTAAGTTTTGGTGGTTTTGAGGATACAAGCTCAACTTTGTTTGTGAAGGTCAGAGCAAATGAGTCATGGACTCCAGAAGGCCAAGAAGGAGGGTCTAATAATAGCTCTTCTGATGGAATGGGAAGTGCAAAGGAGAAGGCTGTGATTATTCCCACAGTTTTGAGCATGGTAGTTCTCATTGTTTTCCTGAGTTTATTACTGTATTACAGTGTTCACAGGAAAAGAACTTTGAAAAGGGAGATGGAAAGTTCCTTGATCTTATCAGGTGCTCCAATGAACTTCACATACCGTGATTTGCAGATCAGGACATGCAACTTTTCACAGCTGCTAGGAACAGGTGGATTTGGGAGTGTATATAAAGGAAGTCTGGGAGATGGTACTCTAGTGGCAGTGAAGAAACTTGACAAGGTTTTGCCTCATGGAGAGAAGGAATTCATCACCGAAGTAAACACTATTGGCTCAATGCATCATATGAATTTGGTTCGCCTATGCGGCTATTGTTCTGAGGGATCACATAGGCTTCTGGTTTATGAGTTCATGAAGAATGGGTCATTGGATAAATGGATCTTCCCTTCGTATCAAGGGCGAGATAGATTGTTAGATTGGACAACTCGTTTGAATATAGCCATAGCTACTGCACAAGGGATTGCGTACTTTCACGAGCAATGCAGGGATCGGATAATACACTGTGACATAAAACCAGAGAATATATTGGTAGACGAAAACTTTTGTCCAAAAGTATCTGATTTTGGACTGGCCAAATTGATGGGAAGGGAGCACTCTCATGTGGTGACAATGGTGAGAGGCACTAGAGGTTATTTGGCACCAGAATGGGTTGGTAATCGCCCTATAACTGTCAAAGCTGATGTTTACAGCTACGGCATGCTTCTTTTAGAGATCATTGGTGGAAGGAGAAATCTTGACATGTCCTTTGGTCCAGAAGATTTCTTCTATCCTGGTTGGGCTTACAAGGAGATGGCAAATGGGTGTACAAGTAAAGTGGCAGATAGAAGATTGAATGGGGCAGTTGATGAAGAAGAGCTAACGAGAGCTCTGAAAATAGCATTTTGGTGCATCCAAGATGAGATATCAATGCGACCAACAATGGGGGAAGTGGTAAGATTGCTGGAAGATTCGATAGACATTAATATGCCACCAATGCCACAAACAGTGCTAGAGTTAATTGAGGAAGGCTTAGACCATGTATACAAAGCTATGAAAAGAGACTACAATCACTCCAGCTCATTCACTCTTACCAGCCATCTCACATCTCGTGCCACATGTAGCAATTCCACAATGTCACCCAGATAG 2592 0.4387 MAITAASSFSCFCLILAFALSSFRPCISAHIGLGSKLLSSKAQTWLSENGTFALGFTPADSDNRLFELGVWFAQLPGDPTLVWSPNRDTPVSQDAILELDTTGNLVLMDGDITVWTSNTSGAGVKAAVMAESGNFILHNATNHPVWQSFSQPSDTLLPNQLLTVSSELTSSKSSSHGGYYSLKMLQQRTSLSLALTYNLLETYQASDESYTNYSYWKGPDISNVTGEVIAVLDHAGSFGIVYGDSSDGAVYVYKNDGDDAGLPSAVHQSASSTVLRRLTLEKNGNLRLYRWDEVNGSRQWMPQWAAVSNPCDIAGVCGNGVCNLDRSKTRATCTCLPGTSKVGRDGQCYENSSLVGKCNEKDENLTSQFRISTVQQTNYYFSDISVIANYSDTNVSKCGDACLSECDCVASVYGLNEERPYCWVLRSLSFGGFEDTSSTLFVKVRANESWTPEGQEGGSNNSSSDGMGSAKEKAVIIPTVLSMVVLIVFLSLLLYYSVHRKRTLKREMESSLILSGAPMNFTYRDLQIRTCNFSQLLGTGGFGSVYKGSLGDGTLVAVKKLDKVLPHGEKEFITEVNTIGSMHHMNLVRLCGYCSEGSHRLLVYEFMKNGSLDKWIFPSYQGRDRLLDWTTRLNIAIATAQGIAYFHEQCRDRIIHCDIKPENILVDENFCPKVSDFGLAKLMGREHSHVVTMVRGTRGYLAPEWVGNRPITVKADVYSYGMLLLEIIGGRRNLDMSFGPEDFFYPGWAYKEMANGCTSKVADRRLNGAVDEEELTRALKIAFWCIQDEISMRPTMGEVVRLLEDSIDINMPPMPQTVLELIEEGLDHVYKAMKRDYNHSSSFTLTSHLTSRATCSNSTMSPR 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02404 863 ProSitePatterns Protein kinases ATP-binding region signature. 537 560 IPR017441 GO:0005524
Phco6g02404 863 CDD B_lectin 37 152 IPR001480 -
Phco6g02404 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Phco6g02404 863 SMART serkin_6 531 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02404 863 ProSiteProfiles Protein kinase domain profile. 531 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02404 863 Gene3D Phosphorylase Kinase; domain 1 495 606 - -
Phco6g02404 863 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 167 IPR036426 -
Phco6g02404 863 Gene3D - 32 151 IPR036426 -
Phco6g02404 863 SUPERFAMILY Protein kinase-like (PK-like) 509 803 IPR011009 -
Phco6g02404 863 Pfam D-mannose binding lectin 80 167 IPR001480 -
Phco6g02404 863 PANTHER OS07G0415500 PROTEIN 8 815 - -
Phco6g02404 863 Gene3D Transferase(Phosphotransferase) domain 1 607 818 - -
Phco6g02404 863 FunFam Serine/threonine-protein kinase 32 150 - -
Phco6g02404 863 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 607 813 - -
Phco6g02404 863 FunFam serine/threonine-protein kinase PBS1-like 499 606 - -
Phco6g02404 863 ProSiteProfiles Bulb-type lectin domain profile. 29 150 IPR001480 -
Phco6g02404 863 CDD STKc_IRAK 537 804 - -
Phco6g02404 863 PIRSF SRK 1 856 IPR024171 GO:0004674
Phco6g02404 863 Pfam S-locus glycoprotein domain 266 339 IPR000858 GO:0048544
Phco6g02404 863 Pfam Protein kinase domain 534 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02404 863 SMART blect_4 36 152 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02404 Phco-Chr6 45419571 45424029 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phco6g02404 Pkinase 8.9e-47 CL0016