Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02365 ATGGCATCTTCCAAGTTAATGGCTTCTTCCCATTCACGAAAATCAGAATCCTCCTCTCCTTCTCCCGCACCTCAATTCACCACCACCAACTTCATCCCTATCTCCGACGCCGCCGTCACCGCCGCCCCCAAGACCGTCGATGACGTATGGAGGGAGATCGTTGCTGGTGACCGCCGCGAATGCAAGGAGGAGGCTCCTGACGACGAGATGATGACTCTCGAAGACTTCCTCGCCAAGGCCGGCGCAGTCAACGATGACGACAACGAAGAAGTTGACTGCTACATCAAGATGCCAATGCCCCTCACGGAGAGGCTCGGCAGCGGCGTCTTCGCCTTCGATCCCCTCCTCACTGCAACGCCGTTTCAGGACGGAGTGGAAGGCTCCGTCATAGGGTTCGGGAACGGTGTGGAGGTGGTTGAAGGCGGGAGAGGGAAGAGAGCACGTCCCGTTTTGGAGCAGTTGGATAAGGCAGCGCAACAGAGACAGAGGAGAATGATTAAAAACCGAGAATCTGCCGCTAGGTCCCGGGAACGCAAGCAGGCTTACCAAGTGGAATTGGAGTCCTTGGCGGTGAAACTAGAGGAGGAAAACGACAAGCTCTTGAAGGAAAAGGCCGAGAGGAAAAAAGAGAGGTACAAGCAGCTAATGGAAAAAGTACTCCCTATAGCGCAGAAACAAAGGCCACCGTGTACACTCCGTAGGGCTCGCTCCTTGCAGTGGTAG 723 0.5533 MASSKLMASSHSRKSESSSPSPAPQFTTTNFIPISDAAVTAAPKTVDDVWREIVAGDRRECKEEAPDDEMMTLEDFLAKAGAVNDDDNEEVDCYIKMPMPLTERLGSGVFAFDPLLTATPFQDGVEGSVIGFGNGVEVVEGGRGKRARPVLEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERKKERYKQLMEKVLPIAQKQRPPCTLRRARSLQW 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02365 240 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 163 178 IPR004827 GO:0003700|GO:0006355
Phco6g02365 240 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 158 210 IPR004827 GO:0003700|GO:0006355
Phco6g02365 240 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 40 217 IPR043452 GO:0003700|GO:0045893
Phco6g02365 240 Coils Coil 179 218 - -
Phco6g02365 240 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 158 219 - -
Phco6g02365 240 Gene3D - 158 206 - -
Phco6g02365 240 SMART brlzneu 156 218 IPR004827 GO:0003700|GO:0006355
Phco6g02365 240 CDD bZIP_plant_BZIP46 160 206 - -
Phco6g02365 240 SUPERFAMILY Leucine zipper domain 160 211 IPR046347 GO:0003700|GO:0006355
Phco6g02365 240 MobiDBLite consensus disorder prediction 1 30 - -
Phco6g02365 240 Pfam bZIP transcription factor 158 217 IPR004827 GO:0003700|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco6g02365 bZIP_1 9.9e-13 CL0018