Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02254 ATGATATGCAGAGAATGCAAAAATAAAAACGACAACCGTGCTAAAGAACAATCGGATAAACTTTGGTGGAGGGCTTATGTGCCTGTAGCTAGCAAACTCAAGAAGAAGATGACATTAACCCAAATTCCTGAGAGATCATCAGTTGATATGGAATCATGCGTGCCTCCAGGGTTTAGATTTCATCCAACAGAAGAGGAGCTTGTGGGCTACTATCTCAAGAGGAAGATAAACTCCCTGAAAATCGATCTAGATGTTATTGTTGAGATTGATCTATACAAAATAGAACCATGGGACATACAAGATAGGTGCAAGCTAGGATATGAGCAACAAAATGAATGGTACTTTTTCAGCCATAAAGATAAGAAGTATCCTACAGGAACAAGAACTAACAGGGCCACTGCTGCTGGATTCTGGAAAGCAACTGGAAGGGACAAGGCTGTCATGTCCAAAAATAGAATCATAGGGATGAGGAAGACCTTGGTCTTCTACAAGGGACGTGCCCCTAATGGAAGGAAAACAGACTGGATTATGCATGAATATAGGCATCAAACCTCTGAACATGGTCCTCCACAGGAAGAAGGATGGGTTGTGTGCCGAGCATTTCGGAAGCCTAGTCCAAGTCACAGGCAAGGTTATGAGGCATGGTGCAGTAGTAGTAGCCATCAACACTTTTTCAAAGATCAAAGCTTTGTAAGACCCTTATCAATTGCTGATATTTTGAATGAAACAAATGTGCCTCATCATCACCCTGCTGAAGGTCCAAGTTTTAGTCTTCCTTTCGGCTCAGATCAGCAACACTTTATTCTACCAAATCAAACTGTTATGGACAAACAGCTCATTGAGCTTCCTCAGCTAGATAGTCCAACTGCAAGTTTTGCAATGAAGGAATGTAACCAACAACACCACAATGGCCTCACAAATGAGGAATATTGTAGTGATGAAAGGAGCAATAGCAGTGCGCAAGGTATCGATTGGAAGAGTTTGGACAACTTGTTCGGGTCACAGTTGAGTGACACAGCTTATTTTTCACATCCAAACGTGCCCTTGATGATGCCCCATAATAACCATGATCAAGCTAGTCATATCCTAGGATGCTTCCCTGATTCATAG 1110 0.4207 MICRECKNKNDNRAKEQSDKLWWRAYVPVASKLKKKMTLTQIPERSSVDMESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYKIEPWDIQDRCKLGYEQQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQEEGWVVCRAFRKPSPSHRQGYEAWCSSSSHQHFFKDQSFVRPLSIADILNETNVPHHHPAEGPSFSLPFGSDQQHFILPNQTVMDKQLIELPQLDSPTASFAMKECNQQHHNGLTNEEYCSDERSNSSAQGIDWKSLDNLFGSQLSDTAYFSHPNVPLMMPHNNHDQASHILGCFPDS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02254 369 FunFam NAC domain-containing protein 63 207 - -
Phco6g02254 369 Gene3D NAC domain 63 206 IPR036093 GO:0003677|GO:0006355
Phco6g02254 369 ProSiteProfiles NAC domain profile. 54 203 IPR003441 GO:0003677|GO:0006355
Phco6g02254 369 SUPERFAMILY NAC domain 50 203 IPR036093 GO:0003677|GO:0006355
Phco6g02254 369 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 51 289 - -
Phco6g02254 369 Pfam No apical meristem (NAM) protein 55 181 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02254 Phco-Chr6 43707512 43712566 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco6g02254 NAM 1.2e-36 No_clan