Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02212 ATGGGTTTTCCACCAGCAGAGGAACCGGATAGAAAATTTACAGAGCCACCACCGTTCAGAGAGCACATCACAACAGGACTCTCTCTCTATATATCTCTCTCTCACTCTCAGCTACATGGCCTCACTCTTCGATCTGAATCCACGTCTCTGAGCTCATTCCGTCGCCGTTTAATCCCTTTTCCCTCTCCAATCTGCGCTGTCTTTCTCTTCTCGTGTCCGAGCTCCGAGGAAGCCCTAGATTGCTGTGCGGCGCGCCGATTCGGCTGCCGCGTTTTGTTTTCTGTGGCTGCCCATGCTATTGGGTTGGTTTTGATGCCGCCTGAACCATTGCCTTGGGATCGAAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCCGAGTCGCTTGGGTCCGTCGCTAGATGGAGGGATTCCTCGCACCACCGCGACTTCAATCGCTGGGGATCCACTGAGTTTCGCAGGCCGCCAGGTCATGGTAAGCAGGGTGGTTGGCACCTGTTTTCCGAGGACTCAGGTCATGGGTATGCGATTTCTCGGTCAAGCAGTGACAAGATCCTGGAGGAAGATAGTCGGCCCTCGATTTCACGAGGTGATGGGAAGTATGGCAGGAGCAGCAGGGAAAATAGGGGACCCTTTGGTCAGAGAGATTGGAGAGGGCATTCGTGGGAACCCTCCAATGGTACCATGAATTTGCCCAGAAGGCCGCAGGATGTGAACAATGACCAGAGGGCTGTGGACGACGCCCTAGCATATTCTTCTCATCCACATTCCGATTTTGGGAACTCTTGGGATCAGCACCATTTAAAAGACCAGCATGAGAAGATAGGTAGTGTCAATGGGTTGGGAACTGGCCCCAGAAGTGATAGAGAGAACTCTCTGGGTGACTGGAAGCCACTTAAATGGACACGTTCTGGAAGCTTGTCTTCTCGAGGCTCAGGTTTTAGCCACTCAAGTAGCTCAAGGAGCATGGGAGCAGCAGATTCGCATGAAGCGAAGGCTGAGTTGCAAACGAAAAGTGCGGCTGCTAATGAGTCACATTCAGGGGAAGCTGCTGCTTGTGCGACATCTTCTGTGCCATCTGAAGATACGGCTTCTAGAAAAAAGCCAAGGTTGAATTGGGGCGAGGGACTTGCAAAGTATGAGAAGAAAAAAGTAGAGGTGCCTGAGGCAAGTGCAAATAAAGATGGTCCTGTTTTGTCTGCTAGTATCACTGAACCTTGTAATTTCCTCAGTACCAGCTTAGTTGACAAAAGTCCAAAAGTTACAGGATTTTCTGAATGTGCGTCTCCTGCAACTCCATCTTCTGTCGCCTGCAGTTCCTCGCCTGGTATGGACGATAAATTATTCGGAAAGACTGCAAATGTAGACAATGATGTTAGTAATTTTACTTGTTCACCTGCTCCTTTGTCGGAAAATAATTTGCTGAGGTTTCCCTTTAACTTAGAGAAATTTGATATTGGCTCCTTGGATAATTTGGGTTCTTCAATTATTGAGTTGGTAAAATCTGATGATCCAACTTCTGTAGATTCTGGTCCAATGAGGTCCAATGCAATTAATAAATTACTGATATGGAAAGCTGACATTTCAAAGGTGTTGGAGATGACTGAATCTGAAATAGATTTACTTGAAAATGAACTGAGGTCGCTGAAGTCTGAATCTAGGGCAACATGTCAATTTCCGGTATCCTTGGACTCCCAGATGTTAGGTAGTGGGGAAAAATCCTGTGAAGAACATGTTGGAGTCTCTGATCAGGTCACCCGGCTGGTACCTTTGAATGTTGTTGATGATCCCAATATGGAGAAGGTGCCGCTTTCAACTAATTTACTTAGTATTCATGAAAATGTTAAGGAAGATGATATTGATAGTCCTGGAACAGCTACTTCTAAATTTGTTGAGCCTCTGCCTTTAATTAAATCAGTTTCTTGTGGTACTGGAGGATATGTTAGTTTCTCCAGGGACTTGGATTCTGTTCCATCTGCAGCTGTGAAATGCCTAATTCCCTGTTCTGCTAGGAAGGATGTTAGTGTATCTTCTGTTGATGGCAAGACTTCTATGGAGGAAAACGACAGCATGGATATTTTATGTGGTACAATTATTTCTTCCAATAAAGAATCTGCCAACAAAGCTAGTGAGGTGTTTGATAATTTATTGCCCAAAGATTGTTGTAAGATTGGGAAGATGGAAACCAGCAGTGACACATGCAATCATACCTTGATTAGGGAAAAATTTGCTGAGAAAAAGCGATTTGCTAGGTTTAAGGAGAGAGTTATTGCACTAAAGTTCAGAGCCTTGCATCACTTGTGGAAAGAAGATATGCGCCTACTTTCTATCAGGAAATGCCGACCAAAATCTCACAAAAAGAATGAACTAAGTGTGCGAACTACCTGTAATGGTAACCAGAAGAATCGATCATCTATTCGTTCACGTTTTCCCTTTCCTGCAGGAAATCATCTGAGCTTGGTTCCAACATCAGAGATGATTAATTTTACAAGCAAACTGCTTTCAGAATCTCAGGTTAAAGTGCAGAGAAACACTCTGAAGATGCCGGCATTAATTTTAGATGAAAAAGAGAAGACAATTTCAAAGTTTGTATCTAGTAATGGGCTAGTTGAAGATCCATTGGCTATTGAGAAAGAAAGGTCTATGATTAATCCTTGGACGCCACAAGAAAGAGAAGTTTTCTTGGAGAAATTTGCTGCCTTTGGAAAAAACTTTAGGAAAATTGCTTCTTTTCTTGACCACAAGACAACTGCTGACTGTGTTGAATTCTACTACAAAAATCATAAATCTGATTGTTTTGAGAAACTTAAGAAGCAAGATGTTGGTAAGCTGGGGAAGTCATTTTCTGCTAAAACTGACTTGGTGGCATCAGGTAAAAAATGGAATCGTGAATTGAATGCTGCTTCCCTTGAAATTTTGAGTGCAGCTTCGCTGATGGCAGATGGCATTGCAGGTAACAAAAAAATCCGTGCAGGAAGCTCACTATTGGGTGGATATGGTAAAGTAAAGACATCGAGGGTCGAAGACTTCATTGAAAAATCAGGCAGTTTTGACATTCTTGGGGATGAAAGAGAGACTGCTGCTGCGGCTGATGTATTGGCAGGTATATGTGGTTCTCTTTCATCTGAGGCTATTAGTTCCTGCATAACAAGTTCTGTTGATCCAGTAGAAGGTAGCAGGGATAGGAAGTTCCTGAAAGTAAACCCTTTATACAAGCTGCCCATGACACCTGATGTTACTCAAGATGTGGATGATGAGACTTGTTCGGATGAGAGCTGTGGTGAAATGGATCCTACAGATTGGACTGATGATGAGAGGGCTGCTTTTCTTCAGGCTGTATCATCTTTTGGGAAAGATTTTGCCAAGATAGCACGGCGTGTTGGGACAAGGTCCCAAGAACAGTGCAAAGTTTTCTTCAGCAAAGGCCGGAAATGTCTTGGATTAGATCTCATGCGCCCAATATCTGAAAATGTTGGATCCCCAGTGAATGATGATGCAAATGGGGGTGAGAGTGACACTGATGATGCATGTGTCGTTGAGACAGGCTCAGTGGTTGGAACTGAAAAGTCTGGCACTAAAACAGATGAGGACCTGCCTTTGTATGGAACAAACACATTCAACGATGAGTCCAATCCTGTGCAAGCTAGGAATCTGTCAGCAGAATTAAATGAATCAAAGGGGACTAATGGGACAGAACTAGATATTGAAGATGCAAATTTGGTTTCTGATGCATGTGCAATTGATATTGATTCTAAACAGGGCTGTGATGGTAGTGAATTTGCCGTGTGTGGTTCTGTCAGTGGACAAGTAACTGTAGTTATGTCGGATAGCACAGAAATTGGGAAAGATAAAGCTAATAAATTGGGAGGTGCATCTACAGAATTGATATCTGTTCTAGATACAAGTGAACCATGCGAAAGTAATTCTTTTGTTGAGGATAGAATGGTGGTTTCCGAGGTTTCTTCTGACAGACTTGGAAATGAATTGGAGAGGCAAAGAGTGTCTTCACCCCGATGTCTTGACGATAGAGATAATAAACAGGAAGCTGATTCAGGTGTCATAGTTGATTTGAAAAGCCCTGGGCACATGCTAAGCAGCACTGGTGTAAATGCTTCTCTCTCATCTTTTGGGAATTCCTGTTCAGGATTGAGTTCTAGTACTGAAAATAAGCACGTACCCCTTGGAAAGCCTCATGCCTCCCCATTGTCTATGGATGATCATCAAGCATCATCAAATTCATCTTTACAAAATACTGTTGCTTCTGATATTCAGTGTGAGAAAACAGCTAGCCAAGATCGACTGTCTTCTACCTGTGATATTCAGGTTAGCACTGATGACAAGCCCCCCATTACTGGAAATTCATCAGACCATGTTGATGCCGGAAGCATTCTCCAGGGCTATCCCTTGCAAGCTCCCATTAAGAAGGAGATAAATGGTGATATGAGCAGTAGCAGTTCAGCAACAGAATTGCATCTTTTGTCCCAGAAGAATGATCAGCCTGATGATCAAACCCAAAAATTGCAGTCGTCCGATTCAGATAAAACATCCAGAAATGGTGATGTGAAACTTTTTGGGAAGATACTAACTAATCCTTCATCGGCACAGAAACCTAATGTGGGTGCTAAAGGTAGTGAAGAAAATGGTACCCACCATCCTAAGTTCAGCAAGCCTTCTAGTATGAAATTTACTGGGCATAGTGCTGATGGGAATTTGAAAATTTTGAAGTTTGACTGTAATGATTATGTTGGCCTTGAAAATGTTCCTATGAGAAGTTATGGTTATTGGGATGGAAGCAGAATACAGACTGGTCTCTCTTCATTGCCTGATTCTGCCATCCTGCTAGCTAAGTATCCTGCAGCATTCAGTAATTATCCCACATCTTCTGCCAAATTGGAGCAACCGTCATTGCAATCATTTTCCAAGAATAATAATGAACGGCTCCTGAATGGCAGCAATGCCGTGATTGATTATCAGATGTTTAGAAGGGATGGTCCGAAAGTGCAGCCATTTATGGTAGATGTGAAGCACTGCCAGGATGTATTCTCTGAGATGCAGAGAAGAAATGGTTTTGAAGCAATCTCAAGTTTACAGCAGCAGAGCAGGGGAGTGATGGGAATGAATGGTGTTGGAAGACCGGGGATTCTTGTAGGAGGATCGTGCAGTGGTGTCTCAGATCCAGTGGCAGCAATCAAAATGCATTATTCCAATTCTGAAAAGTATGGTGGTCAGTCTGGGAGTATTACAAGAGAAGATGAATCTTGGGGAGGGAAGGGGGACTGA 5280 0.4347 MGFPPAEEPDRKFTEPPPFREHITTGLSLYISLSHSQLHGLTLRSESTSLSSFRRRLIPFPSPICAVFLFSCPSSEEALDCCAARRFGCRVLFSVAAHAIGLVLMPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHRDFNRWGSTEFRRPPGHGKQGGWHLFSEDSGHGYAISRSSSDKILEEDSRPSISRGDGKYGRSSRENRGPFGQRDWRGHSWEPSNGTMNLPRRPQDVNNDQRAVDDALAYSSHPHSDFGNSWDQHHLKDQHEKIGSVNGLGTGPRSDRENSLGDWKPLKWTRSGSLSSRGSGFSHSSSSRSMGAADSHEAKAELQTKSAAANESHSGEAAACATSSVPSEDTASRKKPRLNWGEGLAKYEKKKVEVPEASANKDGPVLSASITEPCNFLSTSLVDKSPKVTGFSECASPATPSSVACSSSPGMDDKLFGKTANVDNDVSNFTCSPAPLSENNLLRFPFNLEKFDIGSLDNLGSSIIELVKSDDPTSVDSGPMRSNAINKLLIWKADISKVLEMTESEIDLLENELRSLKSESRATCQFPVSLDSQMLGSGEKSCEEHVGVSDQVTRLVPLNVVDDPNMEKVPLSTNLLSIHENVKEDDIDSPGTATSKFVEPLPLIKSVSCGTGGYVSFSRDLDSVPSAAVKCLIPCSARKDVSVSSVDGKTSMEENDSMDILCGTIISSNKESANKASEVFDNLLPKDCCKIGKMETSSDTCNHTLIREKFAEKKRFARFKERVIALKFRALHHLWKEDMRLLSIRKCRPKSHKKNELSVRTTCNGNQKNRSSIRSRFPFPAGNHLSLVPTSEMINFTSKLLSESQVKVQRNTLKMPALILDEKEKTISKFVSSNGLVEDPLAIEKERSMINPWTPQEREVFLEKFAAFGKNFRKIASFLDHKTTADCVEFYYKNHKSDCFEKLKKQDVGKLGKSFSAKTDLVASGKKWNRELNAASLEILSAASLMADGIAGNKKIRAGSSLLGGYGKVKTSRVEDFIEKSGSFDILGDERETAAAADVLAGICGSLSSEAISSCITSSVDPVEGSRDRKFLKVNPLYKLPMTPDVTQDVDDETCSDESCGEMDPTDWTDDERAAFLQAVSSFGKDFAKIARRVGTRSQEQCKVFFSKGRKCLGLDLMRPISENVGSPVNDDANGGESDTDDACVVETGSVVGTEKSGTKTDEDLPLYGTNTFNDESNPVQARNLSAELNESKGTNGTELDIEDANLVSDACAIDIDSKQGCDGSEFAVCGSVSGQVTVVMSDSTEIGKDKANKLGGASTELISVLDTSEPCESNSFVEDRMVVSEVSSDRLGNELERQRVSSPRCLDDRDNKQEADSGVIVDLKSPGHMLSSTGVNASLSSFGNSCSGLSSSTENKHVPLGKPHASPLSMDDHQASSNSSLQNTVASDIQCEKTASQDRLSSTCDIQVSTDDKPPITGNSSDHVDAGSILQGYPLQAPIKKEINGDMSSSSSATELHLLSQKNDQPDDQTQKLQSSDSDKTSRNGDVKLFGKILTNPSSAQKPNVGAKGSEENGTHHPKFSKPSSMKFTGHSADGNLKILKFDCNDYVGLENVPMRSYGYWDGSRIQTGLSSLPDSAILLAKYPAAFSNYPTSSAKLEQPSLQSFSKNNNERLLNGSNAVIDYQMFRRDGPKVQPFMVDVKHCQDVFSEMQRRNGFEAISSLQQQSRGVMGMNGVGRPGILVGGSCSGVSDPVAAIKMHYSNSEKYGGQSGSITREDESWGGKGD 1759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02212 1759 MobiDBLite consensus disorder prediction 1434 1461 - -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 1081 1101 - -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 1322 1354 - -
Phco6g02212 1759 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1101 1136 IPR017930 -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 1495 1562 - -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 302 325 - -
Phco6g02212 1759 SUPERFAMILY Homeodomain-like 869 929 IPR009057 -
Phco6g02212 1759 SUPERFAMILY Homeodomain-like 1098 1147 IPR009057 -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 221 237 - -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 1380 1419 - -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 1434 1460 - -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 1739 1759 - -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 1495 1512 - -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 182 216 - -
Phco6g02212 1759 Coils Coil 525 552 - -
Phco6g02212 1759 CDD SANT 1101 1139 IPR001005 -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 1197 1211 - -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 1528 1542 - -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 146 165 - -
Phco6g02212 1759 ProSiteProfiles SANT domain profile. 1099 1139 IPR017884 -
Phco6g02212 1759 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 105 1756 - -
Phco6g02212 1759 Gene3D - 1074 1153 - -
Phco6g02212 1759 Gene3D - 862 934 - -
Phco6g02212 1759 ProSiteProfiles SANT domain profile. 881 932 IPR017884 -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 1324 1351 - -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 1186 1211 - -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 1404 1419 - -
Phco6g02212 1759 Pfam Myb-like DNA-binding domain 1100 1139 IPR001005 -
Phco6g02212 1759 Pfam Myb-like DNA-binding domain 885 926 IPR001005 -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 1083 1098 - -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 338 362 - -
Phco6g02212 1759 SMART sant 882 930 IPR001005 -
Phco6g02212 1759 SMART sant 1097 1145 IPR001005 -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 180 239 - -
Phco6g02212 1759 MobiDBLite consensus disorder prediction 275 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02212 Phco-Chr6 43326936 43334887 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phco6g02212 Myb_DNA-binding 7.8e-09 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02212 6 43326936 43334887 Phco6g02212 6 43326936 43334887 ECH