Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02195 ATGCGGTCATTTCCTCTGGGAACCTCACTATCTCCAACTCCTATAAACACCTCAAAAATATCATCTTTCAATATTAATTTTAAGAAACCAACCACTTTTCCATCTTCGGGTTCAACTCCTCCTCATGAATTCTCTCTCTCCCAATCAGGATTATGTAGAGCAAGTCAAGTAGCTGATTTGTTCCCAACTGTGTCTCCTGAAATTATTGTGCGTGAGGCCAGGTTGGAGGACTGTTGGGAAGTGGCAGAGACTCACTGCAGCTCCTTCTTCCCTGAATATTCTTTCCCATTAGATTTTGTGCTGAGGATGGACAGATTGGTGGCCATGTTGGCAGGATTTACTTTACCAAACGGTTGCAAAAGAACCTGTTTGGTTGCTGTTATTGGCAACTCATTTGGTGAAACTATCGTATTTGGAAGTGATGATTTAAAGGTTGGTGGTTTTGATGGGAAATTCAGCCTCAACAAGGGATATGTGGTTGGTATATTAACAGTAGATACCGTTGCGGACTTTCTACCTAGGAAGGGGCCATTGCGGCAGAAAAGGACTGGAATTGCATACATATCAAATGTGGCAGTCCGGGAAAAATTTAGGCGGAAGGGAATAGCTAAACACTTGGTAGCGAAGGCAGAATCAAAAGCCAGAAGTTGGGGCTGTCGTGCTATTGCATTACACTGTGATTTCAAAAATCCATCTGCCACAAAGTTATACCAAGGCCAAGGTTTCAGGTCTATCAAGGTTCCAGCAGGAGCTAACTGGCCACAGCCAAAGACCTCACCAGATATGAAGTTCAACTTCATGATGAAGCTTATCAACAACTAA 822 0.4307 MRSFPLGTSLSPTPINTSKISSFNINFKKPTTFPSSGSTPPHEFSLSQSGLCRASQVADLFPTVSPEIIVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRMDRLVAMLAGFTLPNGCKRTCLVAVIGNSFGETIVFGSDDLKVGGFDGKFSLNKGYVVGILTVDTVADFLPRKGPLRQKRTGIAYISNVAVREKFRRKGIAKHLVAKAESKARSWGCRAIALHCDFKNPSATKLYQGQGFRSIKVPAGANWPQPKTSPDMKFNFMMKLINN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02195 273 CDD NAT_SF 184 225 - -
Phco6g02195 273 Pfam Acetyltransferase (GNAT) family 157 242 IPR000182 GO:0016747
Phco6g02195 273 Gene3D - 66 246 - -
Phco6g02195 273 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 272 - -
Phco6g02195 273 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 68 269 - -
Phco6g02195 273 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 68 272 IPR000182 GO:0016747
Phco6g02195 273 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 67 247 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02195 Phco-Chr6 43061770 43064198 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phco6g02195 Acetyltransf_1 6.2e-14 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02195 6 43061770 43064198 Phco6g02195 6 43061770 43064198 ECH
Phco5g01138 5 44227436 44230125 Phco6g02195 6 43061770 43064198 PCT