Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02175 ATGTGCAAATCCAGAAAGAGCACCGCTGCGGTACAACCAGGAAGCAGACGAAGCAGGAACACCAACTCCAACAGAAACATGAACAATTCCCCTTGTCCTCACCCAACGCGAACCCTAACATCGTCATCGTCCAATTACGAAACCTCCACCAGCGACGTCCCCATCACAGAATCAACAAGCTACGTATTCGAAAACAACAACAACGACTTATTAGAGTGGTCAAAAGCCTCTTCCATCTCAAGCCGCGCCTCTCTCTCAAGCCTCAAAGATACGCTCCCTGAAAGCCCTAACATATACCACTTCTCCGAGATTTCCGCCGCCACCGCCAACTTCTCCGCCCCACGCCTTTCTTCCTCCTCCTGGCGCTGCCTAATCCGCCACCGAGATGTTGTTGTTTCTCGCCGCAACTTCCGCCAACAAATTGACCTCCCGGAGCTCAGCCGCCGCCTTGCCATGATCTGCCGGAGCCACCACAGTAGCCTCGTCAAACTCCTCGGTGCCTCCGTCTCCGGCGCCGTCATCTTCCTCGTCTACGAATTTGTTCCCGGCGCCAGCATCGCCGACTGCCTCCGTAACCGCCGGAATCCCAGCTTCACTGATCTCGTCACGTGGACCTCGAGGATGCAGATCGCCTCCGACGTCGCGCACGGCCTCGATTACATCCACAATTTCTCTGGTTCCGATTCCGGTTCGGGATCTAGTTCTGGTTTCATTCATAATCACATCAAGAGCTCCAGCATTGTTATCACGGAGGATAATTTGCGCGCGAAAATTTGCCACTTCGGCTCGTCGGATCTCTGCGGCGAGGCGGTCGACGGCACCGGCGAGGAATCCGGTGGGCGGAGGGTGAGGATCGAGGGTACGAGAGGGTACATGGCGCCGGAGTTTCAGGTCAGCGGCGTGGCGACGAAGAAGAGCGACGTGTACGCGTTCGGCGTGGTGATTTTGGAGCTGCTGAGCGGGGAAGAGGCGGTGAAATTTGAATTCAACGACGACGGAAGTTATCAGAGGACGAGCGTGGTGGATACGGCGAGAGTGGCGGCGGGGGAATACGGCGGTGTGAGGAAGTGGATGGATAAGAGGTTGAGGGATTCGTTTCCGGTGAATGTGGCGGAGAGGATGATTCGGGTCGGATTAGACTGTGTCGGGAATGACCCGAATGAGAGACCCGATATGGGTCGCGTGTCGATTGAGGTGTCAAAGTTGTATTTGGAATCGAAGGAATGGGATCAGAAAATGGGAACCGATATTGACTTATCGGCCTCGTTAGCCCCACGATGA 1281 0.555 MCKSRKSTAAVQPGSRRSRNTNSNRNMNNSPCPHPTRTLTSSSSNYETSTSDVPITESTSYVFENNNNDLLEWSKASSISSRASLSSLKDTLPESPNIYHFSEISAATANFSAPRLSSSSWRCLIRHRDVVVSRRNFRQQIDLPELSRRLAMICRSHHSSLVKLLGASVSGAVIFLVYEFVPGASIADCLRNRRNPSFTDLVTWTSRMQIASDVAHGLDYIHNFSGSDSGSGSSSGFIHNHIKSSSIVITEDNLRAKICHFGSSDLCGEAVDGTGEESGGRRVRIEGTRGYMAPEFQVSGVATKKSDVYAFGVVILELLSGEEAVKFEFNDDGSYQRTSVVDTARVAAGEYGGVRKWMDKRLRDSFPVNVAERMIRVGLDCVGNDPNERPDMGRVSIEVSKLYLESKEWDQKMGTDIDLSASLAPR 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02175 426 MobiDBLite consensus disorder prediction 8 52 - -
Phco6g02175 426 Pfam Protein tyrosine and serine/threonine kinase 140 395 IPR001245 GO:0004672|GO:0006468
Phco6g02175 426 SUPERFAMILY Protein kinase-like (PK-like) 139 397 IPR011009 -
Phco6g02175 426 Gene3D Phosphorylase Kinase; domain 1 88 180 - -
Phco6g02175 426 MobiDBLite consensus disorder prediction 1 52 - -
Phco6g02175 426 Gene3D Transferase(Phosphotransferase) domain 1 182 421 - -
Phco6g02175 426 PANTHER OS09G0572100 PROTEIN 1 426 - -
Phco6g02175 426 ProSiteProfiles Protein kinase domain profile. 110 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02175 Phco-Chr6 42753187 42754467 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Phco6g02175 PK_Tyr_Ser-Thr 4.2e-22 CL0016