Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02062 ATGGCTTCCCAGAACCCAGCGGAAGAAGAAAACTCAAAGCGAAATTGGTCCCTCCAAGACTTCGAGATCGGTAAACCTCTGGGAAGGGGCAAATTTGGTAGAGTTTATGTTGCTAGAGAAGTCAAGAGCAAATTTGTTGTGGCGTTGAAGGTTATATTTAAGGAACAAATTGATAAGTACAGAATTAATCACCAACTGAGGAGAGAGATGGAGATACAGACCAGTCTTCGGCACCCTAACATCCTGCGTCTTTATGGTTGGTTTCACGACACTGAACGTGTTTTCTTGATTCTCGAGTATGCTCATAAGGGTGAGCTTTACAAAGAGATGAGAAAAAAGGGCCATTTTACAGAGAAGCAAGCTGCCACGTATATTTTGAGCCTCACGAAGGCGTTGGCTTATTGCCACGAGAAGCATGTTATTCATAGGGATATCAAGCCTGAAAATTTGTTGCTGGATCACGAGGGTCGTCTTAAAATTGGAGACTTTGGTTGGTCTGTTCAGTCTAAAAGCAAAAGACATACCATGTGTGGCACATTGGATTATTTAGCACCAGAAATGGTTGAAAATAAAGCTCATGACTATGCAGTTGATAACTGGACTCTTGGTATCCTTTGTTATGAGTTCCTCTTTGGTGCCCCTCCATTTGAGGCTGAGAGTCAAGCTGATACCTTCAAAAGGATAATGAAGGTTGACCTAAGCTTCCCTTCCAACCCTTCTATTTCTTTAGATGCCAAAAGTCTGATTAGCCGGCTTCTGGTGAAAGACTCCTCACGAAGGCTCTCTCTTCAGAAGATAATGGAGCATCCTTGGATAATCAAGAATGCAGATCTTACGGGTACCTACTAG 849 0.4276 MASQNPAEEENSKRNWSLQDFEIGKPLGRGKFGRVYVAREVKSKFVVALKVIFKEQIDKYRINHQLRREMEIQTSLRHPNILRLYGWFHDTERVFLILEYAHKGELYKEMRKKGHFTEKQAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSKSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLFGAPPFEAESQADTFKRIMKVDLSFPSNPSISLDAKSLISRLLVKDSSRRLSLQKIMEHPWIIKNADLTGTY 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02062 282 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
Phco6g02062 282 FunFam Aurora kinase A 13 104 - -
Phco6g02062 282 FunFam Serine/threonine-protein kinase ark1 13 281 - -
Phco6g02062 282 CDD STKc_Aurora 20 272 - -
Phco6g02062 282 Pfam Protein kinase domain 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02062 282 PIRSF ILK 1 275 - -
Phco6g02062 282 Gene3D Transferase(Phosphotransferase) domain 1 105 279 - -
Phco6g02062 282 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 8 276 IPR030616 GO:0004672
Phco6g02062 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Phco6g02062 282 Gene3D Phosphorylase Kinase; domain 1 9 104 - -
Phco6g02062 282 ProSiteProfiles Protein kinase domain profile. 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02062 282 SMART serkin_6 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02062 282 SUPERFAMILY Protein kinase-like (PK-like) 15 275 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02062 Phco-Chr6 40733165 40735633 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Phco6g02062 Pkinase 4.9e-75 CL0016