Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02060 ATGAAGTTAAGCATGGGTTCATTTTTACTGCGCAAACAAACACCACCAACCCACACCCGTGATTCTTCTCGCCGTAGATCTGTTCGATTTCGCCGTTCGTCAATGGCCGACGACTTCGAATTTGCTGACAAAGTCCCTCCATCCTTCGATAGCGTGGGAAATGCTTCAAAAGGGTTTAACCCAGGATTAATTGTTCTCCTGCTTGTTGGTGGGCTGATGTTGATATTCTTGGTTGGAAATTTTGTACTCTATACCTATGCACAGAAGACTCTCCCTCCAAGAAGAAAGAAGCCAGTTTCAAAGAAGAAGATGAAGAAGGAGAGACTGAAGCAGGGCGTCTCTGCACCTGGAGAGTAG 357 0.4594 MKLSMGSFLLRKQTPPTHTRDSSRRRSVRFRRSSMADDFEFADKVPPSFDSVGNASKGFNPGLIVLLLVGGLMLIFLVGNFVLYTYAQKTLPPRRKKPVSKKKMKKERLKQGVSAPGE 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02060 118 MobiDBLite consensus disorder prediction 92 118 - -
Phco6g02060 118 Pfam DNA binding protein S1FA 55 118 IPR006779 GO:0003677|GO:0005634|GO:0006355
Phco6g02060 118 PANTHER DNA-BINDING PROTEIN S1FA2 35 118 IPR006779 GO:0003677|GO:0005634|GO:0006355
Phco6g02060 118 MobiDBLite consensus disorder prediction 94 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02060 Phco-Chr6 40703569 40706352 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Phco6g02060 S1FA 6.3e-39 No_clan