Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01953 ATGGGGAGCAGAAGCTACTCCGCCAATCAAGCCGATTACAAGCTTCTAGAAGAAGTTGGTTACGGCGCCAGCGCCACCGTCTACCGAGCAATCTACCTTCCCTACAACGAGGAGGTCGCCGTCAAGTGTCTGGATCTGGATCGCTGCAACAGCAATCTCGAAGACATAAGGAGGGAGGCGCAGACCATGAGCCTAATCGAGCATCCCAACGTCGTCAGGGCCTTCTGCTCCTTCGTTGTCGACCGAAGTCTCTGGGTAGTCATGGGATTCATGGCGCAGGGCTCGTGCTTGCACCTCATGAAGGCGGCGTATCCCGAAGGATTCGAAGAGGCCGCCATCGGATCTATCCTCAAGGAGACTCTCAAGGCGCTCGAGTACCTCCACCGACATGGACACATTCACCGCGACGTTAAGGCCGGCAATATTCTCCTCGATTCCAACGGCCAGGTCAAGCTCGCCGACTTTGGTGTTTCCGCTTGCATGTTCGACACTGGCGACCGCCAGCGCTCCAGGAACACCTTCGTCGGAACTCCCTGCTGGATGGCGCCGGAGGTGCTGCAGCCTGGAGCCGGTTATAATTTCAAAGCGGATATTTGGTCTTTTGGAATCACGGCGTTGGAGTTGGCTCATGGTCACGCACCTTTCTCCAAGTATCCTCCCATGAAGGTTCTTTTGATGACAATTCAGAATGCTCCTCCTGGGCTTGATTATGATCGTGACAGAAAGTTCTCCAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTGGTAAAAGATCAAGCAAAGAGGCCATCCGTGGAGAAGTTGCTCAAACACTCCTTCTTCAGACAAGTGAAGCCTCCGGAGCTTTCTGTTAAGAAATTATTTGCTGATTTACCACCCCTGTGGAACCGTGTCAAATCCCTCCAGCTTAAAGATGCAGCTCAGCTAGCACTGAAGAAAATGCCTTCTGCTGAACAAGAAGCTATATCTCAAAGTGAATATCATCGGGGAGTTAGTGCATGGAACTTCGATATTGATGATTTGAAAGCTCAAGCTGCATTGATGCAGGACGATGATGATATTGCAGAGATGAGGGAAGAAGATGAAAACAAATTCTTCAGCTCTTACAAGGGTACAAGTGATTTCCAGTTTACTCTGGACAAAAAGAATTCAAATAACTTGCAACAAGATGAGTTTGCTTTACAAGTAGGTAGTAACGACATACCACAGAGTGAGAAGAGAAATGGATCAGTGGCTGAAGCAACATCCTCTACTTCAGAGAATGATATAGGAACAATCAAAATTAAATCACAATCAGTGAAACTTGGTAAAACCCAAAGTGGACCCCTGGTGCCTGGCTCAGTGCTTGGTCATTCTTTATCTGAAAAAGGGCGTGCATTTGAAAGGTTTGAGAATGAAAATCAGTTATCAAGCGAGAAAAGTAATCGTGATATTCGACGAGCTCCTAGCTTTAGTGGTCCATTAATGCTTCCAAACCGAGCTTCAGCAAATAGTTTATCAGCTCCAATAAAATCTTCTGGAGGATTCAGAGATTCCTTGGATGATAAATCTAATAAGGCTAATCTAGTGCAAATTAAAGGACGGTTTTCAGTGACATCAGAAAATTTAGATCTGGTGAAGGATATTCCTGTAAGTTCAGTTTCACGCCGATCGTCACAGGGGTCTCCAATGAGGAAATCTGCCAGTGTTGGTGATTGGATGGTGGATTACAAGCAGATGCCAATTGGTCAGTCCTCCAATGATTCTTCTTCCAATATCAATATTCCTGCATCATTTCTAGTGCCTCATCTTCATAATCTTTTCCAGCAGACATCAATTCAACAGGATCTTATAGTGAATATGTTGAATGGCTTGCAAACTGCTGAGGCAATTGATGCTTCTCAGAATGGAAAGTTGCCACCATTGCCTCGCAATGCAGAAAACAATGGAAGTGTTGATACAGCAGTTTCAGAGAGGGAACATCTGCTGCTGGCCAAAATTTCAGAACTCCAATCTCGGATGATTAATTTGACTGATGAACTAACTTATGAGAAGTTAAGATACGTGCAGTTACAACAACAGCTAGCTGCGGTCTACAGCCAAGAACAAAATGGGGAAAGAGAGGAATATGCATGA 2115 0.4572 MGSRSYSANQADYKLLEEVGYGASATVYRAIYLPYNEEVAVKCLDLDRCNSNLEDIRREAQTMSLIEHPNVVRAFCSFVVDRSLWVVMGFMAQGSCLHLMKAAYPEGFEEAAIGSILKETLKALEYLHRHGHIHRDVKAGNILLDSNGQVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGAGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDQAKRPSVEKLLKHSFFRQVKPPELSVKKLFADLPPLWNRVKSLQLKDAAQLALKKMPSAEQEAISQSEYHRGVSAWNFDIDDLKAQAALMQDDDDIAEMREEDENKFFSSYKGTSDFQFTLDKKNSNNLQQDEFALQVGSNDIPQSEKRNGSVAEATSSTSENDIGTIKIKSQSVKLGKTQSGPLVPGSVLGHSLSEKGRAFERFENENQLSSEKSNRDIRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSLDDKSNKANLVQIKGRFSVTSENLDLVKDIPVSSVSRRSSQGSPMRKSASVGDWMVDYKQMPIGQSSNDSSSNINIPASFLVPHLHNLFQQTSIQQDLIVNMLNGLQTAEAIDASQNGKLPPLPRNAENNGSVDTAVSEREHLLLAKISELQSRMINLTDELTYEKLRYVQLQQQLAAVYSQEQNGEREEYA 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01953 704 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01953 704 Gene3D Transferase(Phosphotransferase) domain 1 94 325 - -
Phco6g01953 704 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 4 678 IPR047173 GO:0043539
Phco6g01953 704 FunFam Serine/threonine-protein kinase BLUS1 2 90 - -
Phco6g01953 704 MobiDBLite consensus disorder prediction 398 423 - -
Phco6g01953 704 Pfam Protein kinase domain 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01953 704 MobiDBLite consensus disorder prediction 461 479 - -
Phco6g01953 704 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Phco6g01953 704 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 94 324 - -
Phco6g01953 704 SMART serkin_6 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01953 704 SUPERFAMILY Protein kinase-like (PK-like) 12 326 IPR011009 -
Phco6g01953 704 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Phco6g01953 704 MobiDBLite consensus disorder prediction 461 480 - -
Phco6g01953 704 CDD STKc_OSR1_SPAK 12 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01953 Phco-Chr6 38902282 38909825 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Phco6g01953 Pkinase 2.2e-59 CL0016