Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01917 ATGTTCAAATTCTTGAAAGAGGTGGTGGCTGGATCTGGCACCGGCCTCAAAGATCTTCCATACAATATCGGTGAACCTTACGCTTCCGCTTGGGGCTCGTGGCTTCATTTTCGCGGCATCTCCAAGGATGATGGTTCTCCAGTGTCAATATTTTCTCTGTCTGGGAGCAATGCTCAGGATGGACATTTAGCTGCGGGTCGTAATGGTGTTAAGCGTCTACGCACTGTTAGGCATCCGAATATTTTGTCTTTTCTTCACAGCACAGAGATTGAAACTGTTGATGCTGGTTCTCCCAAGGTTACAATTTATATGGTGACCGAGCCTGTAATGCTGCTGTCAGACAAGATTAAGGAGCTAGGTCTTGAAGGTACCCAAAGGGATGAATACTATGCTTGGGGCCTGCATCAAATAGCAAAGGCTGTGAGCTTCTTAAATAACGATTGTAAACTCGTTCATGCTAATGTTTGCTTGGCAAGTGTTGTTGTCACACAAACTTTGGACTGGAAACTCCATGCTTTTGATGTTCTGTCAGAGTTTGATGGGAATAACGAAACTTCCTCTGGGCAAATGCTGCAATATGCATGGCTTGTTGGAACACAATACAAATCAATGGAACTGGCAAAATCTGACTGGGCTGGAATTAAGAAGTCTCCTCCATGGGCCATTGATTCTTGGGGCATGGGTTGTCTAATCTATGAGCTATTCTCTGGTTTAAAGTTGAGCAAAACGGAGGAGTTACGGAACACTGTCTCCATTCCTAAGTCTCTGCTTCCAGATTACCAGCGGCTGCTGAGTTCTGTGCCCTCTCGGAGATTAAATACATCAAAGCTTATAGAAAACAGCGAGTATTTTCAAAATAAGTTAGTGGACACGATACATTTCATGGAAATTCTTAGTTTGAAAGATAGTGTTGAGAAAGACACTTTCTTCCGCAAGCTTCCAAATTTGTCAGAGCAGCTTCCTCAGCAGATTGTGTTGAAAAAGTTACTTCCTTTATTAGCTTCTGCACTTGAATATGGTTCAGCTTCTGCCCCGGCTTTGACTGCATTGTTGAAAATGGGTTCTGGGTTGTCAGCTGAGGAGTTCCGTGTCAAGGTGCTTCCAACCATTGTTAAACTTTTTATATCAAATGATCGAGCTATTCGAGTTGGACTTCTACAACATATTGATCAGTATGGGGAGTCATTATCAGCACAAGTTGTTGATGAGCAGGTTTACCCTCATGTTGCTACCGGGTTCTCTGATACATCTGCTTTTCTGAGGGAACTTACTCTCAAGTCCATACTAATTCTGGCTCCAAAGCTGTCCCAAAGGACTTTTTCGGGGTCATTATTAAAGCATATGTCAAGGTTACAGGTCGATGAAGAACCAGCTATACGAACAAATACTACCATCTTATTGGGAAACATTGCATGCTACTTAAATGAAGGGACAAGAAAAAGAGTGTTGATTAATGCTTTCACAGTCCGTGCTCTACGTGATACCTTTCCACCTGCTAGAGGAGCAGGCATTATGGCTTTATGTGCCACCGGTTCCTACTATGACATCACTGAAATTGCAACTCGGATTCTTCCTAATATTGTTGTACTCACAATTGATCCTGACAGTGATGTGCGATCTAAGGCATTTCATGCTGTGGATCAATTTTTGCAAATGGAAAAGCAATATTATGAAAAGACAAATACGGCAGAGGCTACTGAGGGAACTAGCATGGGGATCTCTTCAATGCCAGGAAATGCTGGTTTACTTGGATGGGCTATGAGTTCCTTAACTCTGAAGGGTAAACCTTCTGATCATGCTCCAGTCTCTGCTACTGCAGATACTCCAATATCTGCTAATGCCAGCTCAGATACTCCTCCAAAAGCGCCTGTTCGTGTAAGGTCTGCGCCAGATTTTGCTGAGCAACTTGTCCCTACTTCCCCAACATCAACAGACGGCTGGGGGGAACTGGAGAATGGACTCGACGAGGAGTGTGAAAATTTAAATGATAAGGAGGGGTGGGATGATCTGGAGCCACTTGAAGAAATGAAACCAACTTCAGCTCTTGCAAACATTCAAGCAGCTCAAAGGCGGCCGGTTTCTCAACCTGTTTCGCAGACAAAGCTAGCCTCGAGTTTGCAATCCAAAAGTACATCAAAGTTGAGAAAGGATGAAGATGATGAGTTGTGGGATTCCATAGCAGCTCCTGCTCCAAAAACATCAAAAACTTTAAATTTGAAATCAACTGTAGCCGATGATGATGATCCTTGGGCTGCCATCGCTGCTCCTGCACCCACTTCTAAGGCCAAGCCCTTATCAACAACTGGCAGAGGGCGGAGTGCTAAACCTGCTGCTCCAAAGTTAGGTGCTCAGCGGATAAACCGGACAACATCATCGGGCATGTAA 2385 0.4407 MFKFLKEVVAGSGTGLKDLPYNIGEPYASAWGSWLHFRGISKDDGSPVSIFSLSGSNAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTEIETVDAGSPKVTIYMVTEPVMLLSDKIKELGLEGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHANVCLASVVVTQTLDWKLHAFDVLSEFDGNNETSSGQMLQYAWLVGTQYKSMELAKSDWAGIKKSPPWAIDSWGMGCLIYELFSGLKLSKTEELRNTVSIPKSLLPDYQRLLSSVPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLSEQLPQQIVLKKLLPLLASALEYGSASAPALTALLKMGSGLSAEEFRVKVLPTIVKLFISNDRAIRVGLLQHIDQYGESLSAQVVDEQVYPHVATGFSDTSAFLRELTLKSILILAPKLSQRTFSGSLLKHMSRLQVDEEPAIRTNTTILLGNIACYLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATGSYYDITEIATRILPNIVVLTIDPDSDVRSKAFHAVDQFLQMEKQYYEKTNTAEATEGTSMGISSMPGNAGLLGWAMSSLTLKGKPSDHAPVSATADTPISANASSDTPPKAPVRVRSAPDFAEQLVPTSPTSTDGWGELENGLDEECENLNDKEGWDDLEPLEEMKPTSALANIQAAQRRPVSQPVSQTKLASSLQSKSTSKLRKDEDDELWDSIAAPAPKTSKTLNLKSTVADDDDPWAAIAAPAPTSKAKPLSTTGRGRSAKPAAPKLGAQRINRTTSSGM 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01917 794 MobiDBLite consensus disorder prediction 753 794 - -
Phco6g01917 794 SUPERFAMILY Protein kinase-like (PK-like) 37 287 IPR011009 -
Phco6g01917 794 MobiDBLite consensus disorder prediction 604 618 - -
Phco6g01917 794 Gene3D - 282 559 IPR011989 -
Phco6g01917 794 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Phco6g01917 794 MobiDBLite consensus disorder prediction 594 651 - -
Phco6g01917 794 SMART serkin_6 37 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01917 794 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 10 769 - -
Phco6g01917 794 Pfam Protein kinase domain 39 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01917 794 MobiDBLite consensus disorder prediction 687 720 - -
Phco6g01917 794 ProSiteProfiles Protein kinase domain profile. 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01917 794 MobiDBLite consensus disorder prediction 687 710 - -
Phco6g01917 794 SUPERFAMILY ARM repeat 293 552 IPR016024 -
Phco6g01917 794 Gene3D Transferase(Phosphotransferase) domain 1 115 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01917 Phco-Chr6 38104190 38119107 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Phco6g01917 Pkinase 4.9e-08 CL0016