Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01905 ATGCGGGCATCGCCACGGCGCGAGACATGCGGGCATTGCCAGGGCGAGAGACATGCGGTCGTCGCCAGGGATAGACATTGGTCTTTTCTGGGAGCTTCTGAAGTAGTATTTTCTGATGTGTTTGGTCCATCTCCTGTTGAAGCCTCAATAACAGTAAGCTCCGAGAAACATGGAGATTATGTAGCTACACGAGGTTCAGGTGGAAAGATTTACAATGATTTTGACTTGAATAACATTTGTTCTCAATCTTTATTGGCTCCCACAACTTGTATTGGTCAGTCCTTGCAGCTTAGCAAGCTCACCTTACATGAGACAGAAGATGCATTAGATCTTGAGGAGGGAAAGGTGTACCAGGTGAGGAGGGCAGGTTCTTCTGAAATGTATGCTATGAAGGTCATGCGCAAGGATAAGATCATTGAGAGAAACCATGTCGAATATGTAAAATCTGAAAGGGATATACTAACAAAGACCAAATATAGGTTGTACCTTGTGCTTGATTTTGTCAATTGTGGCCACCTTTTCTTTCAGCTCTATCACCAAGGCCTATTTAGGGAAGATTTGGCACGCTTTTATGTCGCAAAGATTATCTATGTCGTTTCTTATATTCATGCAAATGAAATAATGCACAAGGATCTTAAGCCTGAAAATATTCTTCTCGATGTAGATGGTCATGCTGTGTTAACAGATTTTGGCTTGGCTAACCAATTCAATGAGACTGGAAGATCTAATTCTATGTGTGGAACTGTAGAGTACATGGCCCCTGAAATTGTAATGGCGAAAGGTAATGATAAGGCAGTTGATTGGTGGAGTTTGGGAATTTTACTGTGTATGAAATGCTTACATAGAATCTTAGTATTTTTTGTTTCTGAAGCAAGAAATATAAGTTAA 888 0.4077 MRASPRRETCGHCQGERHAVVARDRHWSFLGASEVVFSDVFGPSPVEASITVSSEKHGDYVATRGSGGKIYNDFDLNNICSQSLLAPTTCIGQSLQLSKLTLHETEDALDLEEGKVYQVRRAGSSEMYAMKVMRKDKIIERNHVEYVKSERDILTKTKYRLYLVLDFVNCGHLFFQLYHQGLFREDLARFYVAKIIYVVSYIHANEIMHKDLKPENILLDVDGHAVLTDFGLANQFNETGRSNSMCGTVEYMAPEIVMAKGNDKAVDWWSLGILLCMKCLHRILVFFVSEARNIS 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01905 295 Gene3D Transferase(Phosphotransferase) domain 1 168 276 - -
Phco6g01905 295 Gene3D Phosphorylase Kinase; domain 1 114 167 - -
Phco6g01905 295 PANTHER RIBOSOMAL PROTEIN S6 KINASE 113 276 - -
Phco6g01905 295 Pfam Protein kinase domain 113 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01905 295 FunFam Non-specific serine/threonine protein kinase 169 253 - -
Phco6g01905 295 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Phco6g01905 295 CDD STKc_AGC 114 275 IPR045270 GO:0004674|GO:0005524
Phco6g01905 295 ProSiteProfiles Protein kinase domain profile. 56 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01905 295 SUPERFAMILY Protein kinase-like (PK-like) 114 280 IPR011009 -
Phco6g01905 295 SMART serkin_6 109 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01905 Phco-Chr6 37898608 37901808 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Phco6g01905 Pkinase 5.5e-40 CL0016