Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01854 ATGGAGTTTTGGATCGGAGCCGTTGGTAAAAAGTGGAAAATGGAGTGGCATAAAGGTATGCAACGTGGTGGCTCTCCAATGTCTGGATGGTTGTCCTGTGTTAACACAAGAAGAAGAGAAAAAGAAAGGAAGGAAAGAAGAATGTGCGAAACGCTGAAGACGCAGTACCAGGTAAACGAGGAGATCGGTCGTGGTCGGTTCGGAACCATCTTCCGGTGTTTCCATCCTCTCTCCAACGAGCCCTACGCCTGCAAGGTCATCGACAAGTCTCTTCTGGCCGATTCCACGGACCGCGAGTGCCTCCAAAATGAACCAAAATTCATGACCCTCCTCTCTCCTCATCCCAACATCCTCCAAATCTTCGATGTCTTCGAGGACGACGATTATCTCTCCATCGTCATGGACCTCTGCCAGCCCCACACCCTCTTCGACCGCATCGTTAACGGCCCTATCTCCGAGCCCCAGGCGGCTCTCCTCATCAAGAACCTTCTCGAAGGCGTCGCCCACTGCCACCGCCTCGGCGTGGCTCACCGCGACATCAAGCCCGACAATGTTCTCTTCGACTCGGCGGGTAATCTGAAGCTGGCTGACTTCGGGTCGGCGGAGTGGTTCGGCGACGGAAGCAGCATGAGTGGCGTGGTGGGGACGCCGTACTACGTGGCGCCGGAGGTTGTGATGGGAAGGGAATATGATGAGAAAGTTGATGTATGGAGCTGTGGTGTTATTTTGTACATAATGTTGGCAGGGATTCCTCCTTTTTATGGAGAGTCTGCTGCTGAGATCTTTGAGGCTGTGGTCAGGGCTAACCTTCGCTTCCCTTCTAGAATCTTCCGGACTGTCTCCCCCGCCGCCAAGGATCTCCTCAAAAAAATGATCTGTCGAGACCCCTCTAGAAGGTTCTCTGCCGAGCAAGCCTTGAGACACCCATGGATCTTGAGTGCGGGTGACACAGCTCATATGACTTGA 966 0.5352 MEFWIGAVGKKWKMEWHKGMQRGGSPMSGWLSCVNTRRREKERKERRMCETLKTQYQVNEEIGRGRFGTIFRCFHPLSNEPYACKVIDKSLLADSTDRECLQNEPKFMTLLSPHPNILQIFDVFEDDDYLSIVMDLCQPHTLFDRIVNGPISEPQAALLIKNLLEGVAHCHRLGVAHRDIKPDNVLFDSAGNLKLADFGSAEWFGDGSSMSGVVGTPYYVAPEVVMGREYDEKVDVWSCGVILYIMLAGIPPFYGESAAEIFEAVVRANLRFPSRIFRTVSPAAKDLLKKMICRDPSRRFSAEQALRHPWILSAGDTAHMT 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01854 321 Pfam Protein kinase domain 56 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01854 321 SUPERFAMILY Protein kinase-like (PK-like) 49 313 IPR011009 -
Phco6g01854 321 FunFam Phosphoenolpyruvate carboxylase kinase 1 48 138 - -
Phco6g01854 321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Phco6g01854 321 FunFam Phosphoenolpyruvate carboxylase kinase 2 48 321 - -
Phco6g01854 321 ProSitePatterns Protein kinases ATP-binding region signature. 62 85 IPR017441 GO:0005524
Phco6g01854 321 PANTHER SERINE/THREONINE-PROTEIN KINASE 40 314 - -
Phco6g01854 321 SMART serkin_6 56 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01854 321 CDD STKc_CAMK 55 310 - -
Phco6g01854 321 ProSiteProfiles Protein kinase domain profile. 56 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01854 321 Gene3D Phosphorylase Kinase; domain 1 31 138 - -
Phco6g01854 321 Gene3D Transferase(Phosphotransferase) domain 1 140 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01854 Phco-Chr6 35614781 35617384 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phco6g01854 Pkinase 8.3e-74 CL0016