Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01771 ATGAATTCAGAGAAGCCAGTCAGCCCTGAGAATTTAAGTGATGAAAATGATCAAGAAGAAGCACATGATGACACTGGTGGAACCAAACGCTCTTATGAGTGCACATTCTGCAAAAGAGGCTTCACAAACGCTCAGGCATTAGGGGGTCACATGAATATCCATAGAAAAGACAGGGCCAAGGCCAAGCAATTCACACTTGACGCTTCACCTTCAATGAAGAAATTCAACAGTGATGAATCCATAGTCTTTCCTTTTGTCTCAGAAACCTTAAACCTACCCGCAAGGCCTTACTCCATTTTGGAGTCTCAGAGGAACTGTGACAAGCACTTTCATCCACCAGCACCTGCAAGTGCCTTTTATTATGAGTTTTATGACCCGAGGTCTCGGTCTTTAAGTTTGAACCAAGAGCTTCGCGGTGCCAACTTGAGTCTCCAAATTGGTCAAAGTCATCATGTGGATGATAATATTCATCAAGTCAGGAGAGGAAACCAGAAAGATAGTGAAGTGGACTTGGAGCTCAGACTTGGCCATGATCCATACTGA 543 0.4383 MNSEKPVSPENLSDENDQEEAHDDTGGTKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQFTLDASPSMKKFNSDESIVFPFVSETLNLPARPYSILESQRNCDKHFHPPAPASAFYYEFYDPRSRSLSLNQELRGANLSLQIGQSHHVDDNIHQVRRGNQKDSEVDLELRLGHDPY 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01771 180 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
Phco6g01771 180 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 59 IPR013087 -
Phco6g01771 180 MobiDBLite consensus disorder prediction 1 29 - -
Phco6g01771 180 Gene3D Classic Zinc Finger 13 83 - -
Phco6g01771 180 PANTHER OS07G0101800 PROTEIN 13 178 - -
Phco6g01771 180 SMART c2h2final6 32 54 IPR013087 -
Phco6g01771 180 SUPERFAMILY beta-beta-alpha zinc fingers 29 58 IPR036236 -
Phco6g01771 180 Pfam C2H2-type zinc finger 32 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01771 Phco-Chr6 23537695 23538237 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco6g01771 zf-C2H2_6 1.8e-05 CL0361