Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01747 ATGAGTGAATACCTTCAGCGAGACTACGTCGTTTCGGAAGAGATTGGCCGGGGAAGATTCGGTACCGTTTACCGATGCTCGTCGGCGGACTCTGGCGAGTTCTACGCCGTTAAATCCATAGACAAGGTAGCCATAAGTGCCGCCGGAGACTCCCTGGACACCCAATGCCTCTTTACTGAGGCCAAGATCGTTCAGCTGCTCTCCCCTCACCCTCACATCGTCAATCTTCACACCCTCTATGAAGACGAAACGCACCTCCACATGGTTCTCGACCTCTGTTACGAACCCAAGTTTCATCACCAGGTCATGCCGGAACGCGAAGCTGCTTCGGTGATGTGGCAGCTCATGAAAGCCGTGGCCCACTGCCACCTTCACGGCGTGGCCCACCGAGACATAAAGCCCGACAACATTCTTTTCGATGAGGAGAATCGGCTGAAGCTAGCCGATTTCGGCTCGTCTGATACTTTTAAAGAGGGCGAGCCGATGAGCGGGGTGGTGGGGACGCCTCCTTACGTGGCTCCCGAGGTCCTCGCTGGAAGGGATTATAACGAGAAAGTGGACGTGTGGAGTGGCGGCGTGGTTTTGTATCAAATGTTGGCCGGGTTTTTGCCCTTTCGAGGCGATTCCCCTGTGGAGATTTTTGAGGCTGTGCTGCACTCCAGTTTGAGATTCCCTACCCGGGTTTTTTCTTCTGTTTCACCTGCCGCCAAGGATCTCCTTCGTAGAATGTTGTGCAGAGATGTCTCTAGAAGGTTCTCTGCTGAACAAGTTCTGAGTAAGTTTTGGTTTTCCAAGTATTTGGACACCAATGGTTTAGCATTACTGAACAGACTGACTGATCTTTCTCTCTGA 852 0.5235 MSEYLQRDYVVSEEIGRGRFGTVYRCSSADSGEFYAVKSIDKVAISAAGDSLDTQCLFTEAKIVQLLSPHPHIVNLHTLYEDETHLHMVLDLCYEPKFHHQVMPEREAASVMWQLMKAVAHCHLHGVAHRDIKPDNILFDEENRLKLADFGSSDTFKEGEPMSGVVGTPPYVAPEVLAGRDYNEKVDVWSGGVVLYQMLAGFLPFRGDSPVEIFEAVLHSSLRFPTRVFSSVSPAAKDLLRRMLCRDVSRRFSAEQVLSKFWFSKYLDTNGLALLNRLTDLSL 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01747 283 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Phco6g01747 283 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Phco6g01747 283 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Phco6g01747 283 SMART serkin_6 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01747 283 ProSiteProfiles Protein kinase domain profile. 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01747 283 Gene3D Transferase(Phosphotransferase) domain 1 93 274 - -
Phco6g01747 283 CDD STKc_CAMK 8 259 - -
Phco6g01747 283 FunFam Maternal embryonic leucine zipper kinase 1 271 - -
Phco6g01747 283 Pfam Protein kinase domain 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01747 283 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 266 - -
Phco6g01747 283 SUPERFAMILY Protein kinase-like (PK-like) 4 269 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01747 Phco-Chr6 22099658 22100586 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phco6g01747 Pkinase 1.2e-68 CL0016