Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01721 ATGTTAATACAAACTTCTCTCCTTAGTTTAGTTGAAGCTGGTCTATGTTATGTATCTGATGATGGGAAAGATGTTCTATGTGACCAGATGCCTAGTGGTGAAACTTGGCAGACATCAACTGCTAGTATCATCACGGAAAATACTACACCTAAACCTAAGATGATATACAGGAGAAAGAAGCTTCGTAAGGACTCAAATTTCAAGCTAGAGCCAACTAATATGCAGGCAAGTGCAAACTACCCTTCAGCCATAAGCTCTGCTGCACATTTATCATCAGCTGAGGAACAGCCAGCTGGTTTTCGGGTAAATCATGAAATTGAAGTGGTTAAAAATCCTACTACACCTTCAGTCTTGTTTGATGGAGTAGCCAAAGATAGCACCCATAAAAACTTAGGTATTAGCAGTGTAAATGATAGTTGCTCCTCTTCAAAGCCAGATATGGAAACTGAAATGGATGGAAATGGTGAATGCTACTCCTCCAGTGTAATAGTCATGGATTCCACTAGGGAAGAAGTGACGGAAAAGGATTTCTGCATTAAGACTTTAAGAACCCATGGACTTCTTAGAGAATATTCTCCTGAAGATAATGTGGCTTCTGGGAAAGATGCTGCCATCACTGGTAATAGCTGCTGTTTCAGGTCGTGCAAAATATGTGATCGTTTAGACAGTTCACTGAACATGCTTTTATGTGATCATTGTGAAGATGCATATAATCCGTCTTGCTACAATCCACGTTTGAAAAAATTGCCAATTGATGAGTGGTTTTGTCATTCATGTCTGAAGAAAAGGCAGAAAAATCTCAAGGAACCAAGTATCCACAATGAATTGGGCAAATGTAGAGCTACCTCAGTTAAGTGTGAAGCAAATCCCATACTTTTGATGTTGAGAGACACTGCGCCACATACAACTGCTGTGCGGGTTGGTAAAGGATTTCAAGCAGAAGTTCTTGACTGGTCAGGTCCGATAAAAAGGTAA 975 0.401 MLIQTSLLSLVEAGLCYVSDDGKDVLCDQMPSGETWQTSTASIITENTTPKPKMIYRRKKLRKDSNFKLEPTNMQASANYPSAISSAAHLSSAEEQPAGFRVNHEIEVVKNPTTPSVLFDGVAKDSTHKNLGISSVNDSCSSSKPDMETEMDGNGECYSSSVIVMDSTREEVTEKDFCIKTLRTHGLLREYSPEDNVASGKDAAITGNSCCFRSCKICDRLDSSLNMLLCDHCEDAYNPSCYNPRLKKLPIDEWFCHSCLKKRQKNLKEPSIHNELGKCRATSVKCEANPILLMLRDTAPHTTAVRVGKGFQAEVLDWSGPIKR 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01721 324 SUPERFAMILY FYVE/PHD zinc finger 213 265 IPR011011 -
Phco6g01721 324 ProSiteProfiles Zinc finger PHD-type profile. 212 262 IPR019787 -
Phco6g01721 324 SMART PHD_3 214 260 IPR001965 -
Phco6g01721 324 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 273 IPR013083 -
Phco6g01721 324 Pfam PHD-finger 215 261 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01721 Phco-Chr6 20611675 20612755 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Phco6g01721 PHD 6.3e-09 CL0390