Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01694 ATGGCACCAATAGGTCCTGGCTTCCGATTCCACCCCACTGACGAAGAGCTGGTGGTGTTCTACCTGAAGCGCAAGATCACCGGAAACCTCTCCCGGTATGACCACATCGCCGTGGTTGATGTCTACAAGCTCGAGCCTTGGGACCTTCCCCCCTTGTCGAAGCTGAAGACCAAGGACTTGGAATGGTACTTCTTCAGCGCGCTGGACCGCAAGTACGGGAATGGCTCCAGGACCAACCGCGCCACCGAGAAGGGCTACTGGAAGACCACCGGAAAGGACCGCCCCGTGGCCCACGGCGACCGCATCGTCGGGATGAAGAAGACCCTCGTTTACCACATCGGTCGGGCCCCGCACGGCCGTCGCACCAACTGGGTCATGCACGAGTACAAGATGCTCGATGAAGAATTGACGCGTGCTGGCACAGTGCTGGATGTGTATGTGGTATGTAGGATTTTCGAGAAGAGTGGTGCTGGACCGAAGAATGGGGCCAAGTATGGTGCTCCCTTGGACGAGAAGGAGTGGGATGTGGAGGAGGAGAATGAGCAGAAGAAAGTGGTTCCCTTGCCGGAGATTGCTCATCATGTGGTGGCTCCGTTGACGGAGACCCCCCATAACTTGGTTTCTCCTCCTTTGCCGGTGACAGCTGCTGCAGCTCCTCCCTTGGTTGCTGATGATGAAGTTTGGAATATTGGGGCCTTTTTGGAAACTAACGATCTTGACATGGAGTTTGATTTGACTGATATGATTGGGAGAGCTACTTTTCCATCATCGAACTTTCATCATGGGGAGTGTAGTACCCACGCTGAGAATTCCCAAAAACTCATCAAGGATCTGGAGCCATTAGAAGGCACCTATGGAATTTTTAGGCCGGAAAATGGCCAGCCTCTTGATATGGCTGAGCAACATGGCATGGGCACAAGTTCAGTGAGAGATGGAGACGATGGTGAGCTGAGCGAGATTGAGAATCTTCTCAATTTCAATTATGCATCGGATAATATGGATCTGGATCTATATTTTGATGCCACCCGGGATCTTCCAGCGGCTGATGATGGATCATTCTTGGAAACCAATGACCTTGCAATTGGGAATGAGGGTAATCCCACTGAGGCTGATCCTTCTGCGAATGATATGCTAGACGAGTATCTTGCATTCCCTGATGATGATATTTGCAATTATATATCTTTCGATCTTCCTCAGATTCCAGAGAGTGAAAACTCTGATTCCAACCAAGGATCACCTTTAACCCAGCAGACTCTGGAGGGAGAAACAGCTGATAAAGCTGTGGTTAGTAAACATGATTCTGAAGCACAAACCAGCAAGGAGGCTTTCTCTGTGCAGAATACAGAGGAGGGAAAGTTAGCACCAGAAAATACAAATCCATTCGTTAAGCGGGCCTATGGATGGTTAGCTAGCATACCTGCTGCTCCTGCACATGCTTTTGAGTTTCCAGCTAAGGATATTATGCTTGGGATTCGTGGTGGAGCTCAGTCTTCCCATACAGATCATATAACTACAGGTATGATCAGCATAACTGACATTACTTTTAGAGGCAATGCGATGGATTGGCCCATGGGCAAAAGCGGAGGGTTTAACACTGCAATATCTACTGAGTTTTCTCAACCGGATGTTAATTGTGCTGCTTTGATACCTCTTTCTGGCAAGACCGCATTTGTGTTGTCACATGGCTGGATTTTCTTGACGGGTTTCTCAGTTCTTATTCTTTCACTTAGTTTCAAGATTGGAAGCATGATGTATACTGGTAAGTGA 1767 0.4878 MAPIGPGFRFHPTDEELVVFYLKRKITGNLSRYDHIAVVDVYKLEPWDLPPLSKLKTKDLEWYFFSALDRKYGNGSRTNRATEKGYWKTTGKDRPVAHGDRIVGMKKTLVYHIGRAPHGRRTNWVMHEYKMLDEELTRAGTVLDVYVVCRIFEKSGAGPKNGAKYGAPLDEKEWDVEEENEQKKVVPLPEIAHHVVAPLTETPHNLVSPPLPVTAAAAPPLVADDEVWNIGAFLETNDLDMEFDLTDMIGRATFPSSNFHHGECSTHAENSQKLIKDLEPLEGTYGIFRPENGQPLDMAEQHGMGTSSVRDGDDGELSEIENLLNFNYASDNMDLDLYFDATRDLPAADDGSFLETNDLAIGNEGNPTEADPSANDMLDEYLAFPDDDICNYISFDLPQIPESENSDSNQGSPLTQQTLEGETADKAVVSKHDSEAQTSKEAFSVQNTEEGKLAPENTNPFVKRAYGWLASIPAAPAHAFEFPAKDIMLGIRGGAQSSHTDHITTGMISITDITFRGNAMDWPMGKSGGFNTAISTEFSQPDVNCAALIPLSGKTAFVLSHGWIFLTGFSVLILSLSFKIGSMMYTGK 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01694 588 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 255 - -
Phco6g01694 588 MobiDBLite consensus disorder prediction 439 454 - -
Phco6g01694 588 MobiDBLite consensus disorder prediction 399 418 - -
Phco6g01694 588 MobiDBLite consensus disorder prediction 427 457 - -
Phco6g01694 588 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Phco6g01694 588 FunFam Nac domain-containing protein 86 13 157 - -
Phco6g01694 588 ProSiteProfiles NAC domain profile. 4 154 IPR003441 GO:0003677|GO:0006355
Phco6g01694 588 Gene3D NAC domain 13 157 IPR036093 GO:0003677|GO:0006355
Phco6g01694 588 SUPERFAMILY NAC domain 4 154 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01694 Phco-Chr6 20001186 20004000 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco6g01694 NAM 3.5e-35 No_clan