Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01683 ATGTTTTCTAGGTTGATACATCCCCATGAAGGGGGTGTTGGCCAGGAAGACATGCAGGCTGCTTCCAATCACGCTCACCTCGGAGACCCTTGTCTTGTTCTCACCTCTGATCCCAAACCTCGTCTTCGTTGGACCGCTGACCTTCACGAACGCTTTGTTGATGCTGTCACTCAACTTGGGGGTGCCAGTAAAGCCACTCCTAAAGCGATCATGAGGACCATGAATGTCAAGGGTTTGACTCTCTATCATTTAAAGAGTCATCTTCAGAAGTACAGGCTTGGTAAGCAATCAGGAAAAGATTCTGATGAGGGATGCAAAGATGGGATGTCAGGTTCGTATCTTCAAGAAAGCCCTGGTACTGGCAACTCATCTCCAAAGTTACCAACTTCTGAGGCAAACGAGGGTCATGAAGTCAAGGAGGCATTAAGAGCACAAATGGAAGTGCAAAGCAAACTACACTTACTAGTGGAGGCAGAGAAGCACTTGCAAATTCGGCAGGATGCAGAGCGGAGGTACATGGGCATGCTTGAGCGAGCATGTAAGATGTTGGCCGATCAATTTATTGGGGACATAATTATGGACACAGATGGGCAAAAATTTCAAGGGCTGGAAAGCAAAACACCAAGAAGTTCCCTAGTTGATCACGTTGGGTATTTCCCCCCAGTGTGTTCCGAGGTAGGTGGAATGCATGTTTCAGAAGTAGCAGCTATTCTCCATCCTCAAGGGGCTGACTGTTCCACTGAAAGTTGCCTGACATCACTTGAGAGTCTGGGAGGGTTGACTCTAGAAGGATCTCCCGGCGGATCAAAGAAGAGGATGCTGAGCTTGGATTCAATGGTAGCACCTTTGATCTGGAGTGAAGCCAACACCAGAACTCAAGGAATCCATTTAGCTCAAGTCAATCCTCCAGGAATAACTAGGTATGGCATGTAG 933 0.4759 MFSRLIHPHEGGVGQEDMQAASNHAHLGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDSDEGCKDGMSGSYLQESPGTGNSSPKLPTSEANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAERRYMGMLERACKMLADQFIGDIIMDTDGQKFQGLESKTPRSSLVDHVGYFPPVCSEVGGMHVSEVAAILHPQGADCSTESCLTSLESLGGLTLEGSPGGSKKRMLSLDSMVAPLIWSEANTRTQGIHLAQVNPPGITRYGM 310
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01683 310 MobiDBLite consensus disorder prediction 113 130 - -
Phco6g01683 310 NCBIfam myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
Phco6g01683 310 Gene3D - 38 96 - -
Phco6g01683 310 FunFam Myb family transcription factor 38 96 - -
Phco6g01683 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 96 IPR017930 -
Phco6g01683 310 Pfam Myb-like DNA-binding domain 42 92 IPR001005 -
Phco6g01683 310 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 8 206 IPR044848 GO:0003700
Phco6g01683 310 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Phco6g01683 310 MobiDBLite consensus disorder prediction 93 136 - -
Phco6g01683 310 Pfam MYB-CC type transfactor, LHEQLE motif 137 182 IPR025756 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco6g01683 Phco-Chr6 19815984 19818849 Dispersed/Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phco6g01683 Myb_DNA-binding 1.3e-06 CL0123