Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01632 ATGTTTTGTTTGATGCACTGTCCAATCCAATTCTTACTGCGCCATTTTAAGCAAATACAATTGTTCTCCGACATCTTCGTCGGAAACTCCGAGCCTCATGGAACGTTTTCCTCTTCCTCTCTCTCATTCTCTCGTCTCACAAACAAACTTTCTCTTTCTTCCCAACAAAAACCAAGCTTCAACTCCCATTTTTCTCTTTTGGGTTCCTCTAACCCTACTCCAAAACCTTGCATTCCCATTTCAACTATCTTCAAACCTCATTTTCTAGTGCATGACCAAACAAAAAGGGTTGAAACTTTTAAGTTCCTTCATGGAACTGAGGTGCAGGATCCCGGCATTTCAGGCAAGCTGTATATAGATGGGGTGAATTTTGGTTTAGGCAACAAAGTCTCTTCCGTTGAGGATGGACACAATATATGTCAACAGACGGGTGAAGAGTTTTCTGCAGAGTTCTTGCGTGATCGAGTTGCCTTAAGAAGAATTCCTGTCATAACTGACACAGATCTGCGTCTGTCAAACAGGTTGGATGTTAATATTAAAGATAATAATTCTCAGTTGGTTTTTGAGGATCTAAAGCACGTTATCGGGCTAAGGAGAACAGATTCAGATGGTAACTCGGATTTGTCAGAGATTGCATTTGCCAGAGGATGTGTTGGTGAAGTTGACAACAGGACCTGTTCTAATAATTTGAACAGATACCAGTTTGAACACGGTGGTATAAAACAGGTATCTAGTACATTTTCCGAGGGGGGTGGTTCTGATCAAGTTAATTCAGGACCAAATACTCCATCTATGTACGTGGTTGACTCACCTCATTCATACCATCCTTATGGACCAGTATTCTCAGAAGGTTCTTTCTATAAGAAGATAAAGTTTCTATGTAGCTTTGGAGGTAGAATACTACCCAGACCAAATGATGGGAAGCTCAGATATGTGGGTGGAGAGACACGGATAATATCAATCAGGAAGAACATCGCATGGGAGGAGCTTATGAGGAAGACTTCTGCTATCTGTTGTCAAACTCACACTATCAAGTATCAGCTTCCTGGAGAGGACCTTGATGCTCTTATATCTGTTTGTTCCAATGAGGATCTTCAACATATGATCGAGGAGTATGAGGAGCTTGAAAGAGCTGGAGCTTCTCAACGGCTGAGGATTTTTCTCATTCCTTTAAATGAATGTGAGAGTCCAAGTTCCAATGAAGCAAGAGTCAATCAGCAAATTGATGCAGATTATCATTATGTTGTTGCTGTTAACAGTATGCTTGATCCAAGTCCACAAAAGAATTCCAGTGGGCGTAGTTTAGCAAGCCATACTAGCCAGTTTGGAAATACTTCTGATTACAACAGTCCACATTTTCACAGAGACTCATCCACATCTGCATTTGCTTCAGAGATGAAAGATTGCACCCCAACCTCTCCAAATTTTGCAGGCCTACTCTCAAAACCCAGTCCTCAATATGTTACAGCCCTAGGTGGCAAGTCATTCAATCAAATGTCTCCTTTATATCCTGTTTGTGTACAGCCTAAAGATCCCCAAAATTCTAATGAACAGCTATTTATGGATAAACCATATAATGCTGTTAATGAAAGCATTACTCCCTTTGTTACGGAAAAAGTTTCACATGACAATACTTTGTATGTAGACAATGCCAATTATGTTGATCCAGTTGCATACTATAACAATCTTGCTCAAGGGCCTAGACGCGTGAATTACCATCCTAATAATCAATATATAAGGGAGTCTGACCAGATCAGGAGGCCTCGTGAGAATCTTCACAGACAGAACAAAAGCAACGACTTTTTCTCTTCTACAGTATGTAATCCGAATAATATGAGTTATGATAGACCTTTAATTGCCAATGATGGTTCATATCATCATAACAAGATTTTCTCTCATCCTCACGAGTCTGCAAGTTTATTGTCAGAATCTGATCTTAGAGAGGGATCTCGGTACACATTGTTGCATGCACGCTCTGACTCAACACTTAGTGAGAATGGTGAGAACTATAAACTCCATTTGCAATTTCCCTGTGATGTGGAGAGAGACAATTTTCCATCACGAAAAAATTCAAGCCATTTAGATGAATGTTCATTACAGCCTGGAGAGATAATTGATAGGAAAGAGCACCATGCTAAGTATCAAAATTTGCCCATTTTTGGAATGACTGATAGCTATAACAAAGTATTAGAAATTGGTAAAGAGAGCTTACTTGCAGAAAAGAACAGTGATTTCTTTGATGAAAAGGTTGGAGCTATGTCCCCAGACAATGCCGTAGATTTTAAACACATGCAGTACTTCTACTCTCCACATGGTGTTTTCTCATCTTCTCCAGATTTACAAAGAAGTGAATGCAATGAATCTACTGAGTCTTTTGTCTCTTTCGAATCCACAAAAAACCTGAGGGGGCAAACAAGTGTTCTACCATTAGACAGAGCCACTTCTGAGTTTTCCACGAGGAGCCGAAATTCATCAATGCATCACCAATATGCTATGTCGGTGGCAAAAGACAGTCAACCACTTTTCCCTGGCTCTTTTAAGTCCCAAAATGACAAAGAATCCTCACTACCTATCTCATATATGGACATGGTTTCTTCCCTAAGAGAGGTTGTTATTCCTGCTGAAGATCCTGCTTACCACCTGCACCTAAAGGAAGAAAACAAAGTCATTAAGAATCAGTCTTCTGAATTTATCGATGAATTTTGTGTCAACGAGCCAGTGTCTGATTCCAAGGGACCAAAAGATTACATTTCTTCGGGTATCCAGTCATGCTTAAAAGTTGTCTCAAATGTAGATGAAAAGGCTGAAGTTGAACCTACATCTCCTAAAACGGAAGAGATAGAATGTGATAGTTCAGAATCTGAAAGTAAGCATGCAAGGTCTGATTGTGGAAACTTCAACAAATCTACTGGTGATAGAGCAACTGCTGAAACAGAGACTGAAATTTATGGATTACAGAATATTGAGAATGATGATCTTGAAGAACTGCAAGAGTTGGGATCTGGAACTTTTGGAACTGTTTTTCATGGAAAGTGGAGGGGAACAGATGTTGCAATTAAGAGAATAAAAAGCAGTTGTTTCACGGGTAGAATGTCAGAGCAAGAGCGGCTGACTAAGGATTTTTGGAGAGAGGCACAGATTCTGTCAACTCTTCACCATCCAAATGTGGTGGCGTTTTATGGGGTAGTTCCAGATGGCCCTGGTGGAACATTGGCGACAGTAACTGAATACATGGTGCATGGATCACTCAGGAATGTTCTCATGAAGAGGGAAAAAGTGCTTGACCGTCGTAAAAGGCTCCTGATCGCAATGGATGCAGCCTTTGGGATGGAATATTTGCATTTGAAAAATATTGTTCATTTTGATTTAAAGTGTGATAATTTACTTGTCAATCTGGGCGATCCTGAACGACCTGTGTGCAAGGTTGGAGATTTTGGCCTATCCAGAATAAAACGTAATACACTTGTTTCGGGTGGTGTTCGAGGAACCCTTCCATGGATGGCACCTGAATTACTGGATGGTAACAGCTGTAGGGTGTCTGAGAAGGTTGATATTTTCTCATTTGGCATTGCAATGTGGGAAATCTTGACTGGGGAAGAACCATATGCTAACATGCACTGTGGCGCTATCATAGGCGGTATTGTGAATAATACTCTAAGGCCTCCTATTCCAAAACGATGTGATTCGGAGTGGAAAAAGCTAATGGAAGAGTGCTGGAGTCCTGATCCTGCAGCAAGACCAACCTTCACAGATATTAAAATTAGACTTCACAACATATCAGCTGCACTTCCTAAAAGGAGACATAACACTACCAATCGATGA 3822 0.4048 MFCLMHCPIQFLLRHFKQIQLFSDIFVGNSEPHGTFSSSSLSFSRLTNKLSLSSQQKPSFNSHFSLLGSSNPTPKPCIPISTIFKPHFLVHDQTKRVETFKFLHGTEVQDPGISGKLYIDGVNFGLGNKVSSVEDGHNICQQTGEEFSAEFLRDRVALRRIPVITDTDLRLSNRLDVNIKDNNSQLVFEDLKHVIGLRRTDSDGNSDLSEIAFARGCVGEVDNRTCSNNLNRYQFEHGGIKQVSSTFSEGGGSDQVNSGPNTPSMYVVDSPHSYHPYGPVFSEGSFYKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISIRKNIAWEELMRKTSAICCQTHTIKYQLPGEDLDALISVCSNEDLQHMIEEYEELERAGASQRLRIFLIPLNECESPSSNEARVNQQIDADYHYVVAVNSMLDPSPQKNSSGRSLASHTSQFGNTSDYNSPHFHRDSSTSAFASEMKDCTPTSPNFAGLLSKPSPQYVTALGGKSFNQMSPLYPVCVQPKDPQNSNEQLFMDKPYNAVNESITPFVTEKVSHDNTLYVDNANYVDPVAYYNNLAQGPRRVNYHPNNQYIRESDQIRRPRENLHRQNKSNDFFSSTVCNPNNMSYDRPLIANDGSYHHNKIFSHPHESASLLSESDLREGSRYTLLHARSDSTLSENGENYKLHLQFPCDVERDNFPSRKNSSHLDECSLQPGEIIDRKEHHAKYQNLPIFGMTDSYNKVLEIGKESLLAEKNSDFFDEKVGAMSPDNAVDFKHMQYFYSPHGVFSSSPDLQRSECNESTESFVSFESTKNLRGQTSVLPLDRATSEFSTRSRNSSMHHQYAMSVAKDSQPLFPGSFKSQNDKESSLPISYMDMVSSLREVVIPAEDPAYHLHLKEENKVIKNQSSEFIDEFCVNEPVSDSKGPKDYISSGIQSCLKVVSNVDEKAEVEPTSPKTEEIECDSSESESKHARSDCGNFNKSTGDRATAETETEIYGLQNIENDDLEELQELGSGTFGTVFHGKWRGTDVAIKRIKSSCFTGRMSEQERLTKDFWREAQILSTLHHPNVVAFYGVVPDGPGGTLATVTEYMVHGSLRNVLMKREKVLDRRKRLLIAMDAAFGMEYLHLKNIVHFDLKCDNLLVNLGDPERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSCRVSEKVDIFSFGIAMWEILTGEEPYANMHCGAIIGGIVNNTLRPPIPKRCDSEWKKLMEECWSPDPAARPTFTDIKIRLHNISAALPKRRHNTTNR 1273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01632 1273 Pfam Protein tyrosine and serine/threonine kinase 995 1253 IPR001245 GO:0004672|GO:0006468
Phco6g01632 1273 SMART serkin_6 993 1260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01632 1273 SMART PB1_new 304 391 IPR000270 GO:0005515
Phco6g01632 1273 SUPERFAMILY CAD & PB1 domains 305 394 - -
Phco6g01632 1273 MobiDBLite consensus disorder prediction 935 962 - -
Phco6g01632 1273 CDD STKc_MAP3K-like 999 1252 - -
Phco6g01632 1273 Pfam PB1 domain 305 388 IPR000270 GO:0005515
Phco6g01632 1273 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 986 1080 - -
Phco6g01632 1273 Gene3D Phosphorylase Kinase; domain 1 986 1080 - -
Phco6g01632 1273 MobiDBLite consensus disorder prediction 935 975 - -
Phco6g01632 1273 CDD PB1_UP2 293 389 - -
Phco6g01632 1273 SUPERFAMILY Protein kinase-like (PK-like) 982 1253 IPR011009 -
Phco6g01632 1273 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1081 1272 - -
Phco6g01632 1273 Gene3D - 308 390 - -
Phco6g01632 1273 ProSiteProfiles Protein kinase domain profile. 993 1260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01632 1273 MobiDBLite consensus disorder prediction 423 459 - -
Phco6g01632 1273 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 309 391 - -
Phco6g01632 1273 PRINTS Tyrosine kinase catalytic domain signature 1112 1130 IPR001245 GO:0004672|GO:0006468
Phco6g01632 1273 PRINTS Tyrosine kinase catalytic domain signature 1075 1088 IPR001245 GO:0004672|GO:0006468
Phco6g01632 1273 PRINTS Tyrosine kinase catalytic domain signature 1183 1205 IPR001245 GO:0004672|GO:0006468
Phco6g01632 1273 PRINTS Tyrosine kinase catalytic domain signature 1227 1249 IPR001245 GO:0004672|GO:0006468
Phco6g01632 1273 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1118 1130 IPR008271 GO:0004672|GO:0006468
Phco6g01632 1273 ProSitePatterns Protein kinases ATP-binding region signature. 999 1020 IPR017441 GO:0005524
Phco6g01632 1273 PANTHER SERINE-THREONINE PROTEIN KINASE 334 1254 - -
Phco6g01632 1273 Gene3D Transferase(Phosphotransferase) domain 1 1081 1272 - -
Phco6g01632 1273 MobiDBLite consensus disorder prediction 244 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01632 Phco-Chr6 18876880 18884135 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Phco6g01632 PK_Tyr_Ser-Thr 2.4e-62 CL0016