Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01588 ATGATGCTTAGATTGTATTTATATCACTTGGTGCAGGATGAAATTTCAAGCCCTCTTAGTGCTCGAATTTTTGAACTTTGTAACGCTGAATTTTTCCCAGAGGCTTTGCCAAATTCTGAGGTTACTTCCAGCACAAACTGTTGCTATGAGGAGAACTCCTCGTATGCCACAACAAACAAATCTTTAACTGTAGATGTAGAAAATAAATTGAATAGCAATAGCAACACAGTCCCCACGCCAACTAGCACTACCACCACCAACAACAACAACACAACCAACAGTAGTAACCTGTCTATTATCTTTGACTCCCAAGAAGAAATTGACAATGACATCTCTGCCTCCATAGACTTCTCACTATCTCCATCTTTCAATGTTCCTCCATTTCTCCCAGTAACATCCCAGCAAGAACAGTTTGATTTCTCTTCGGTGCAGCCTCAGGTCCAATTACCAGCTTTTTCAGTTGTGGAGGGCTTCTCTCAGTATCCCACTGACCCAGTTGCACCTCCCCTTATGGGGGCTCCATTACCTTCTGTTTTTGAAGAGGATTGCATATCTTCTGTTCCTTCTTATGTGCCTCTCAACCCTTCATCTCCTTGTACTTATCTCAGTCCTGGCATGCAACCATACATGCCTCCTGGTCCCCTTACTAGTGCCTTATCAACTGATAGTTCTGGATATTTTGGTGGGAACATTCTTCTTGGTTCTGAACTTCAGACGCAAGAATTGGAATACCAAGGAGAAAATGGAAGAATGTATTGTACAGATTCAATTCAGCGGGTGTTTAACCCTCCAGACCTTCAGGCACTTGGTACTGAGAGTCAGCAACTAGTTCCCGGGGGTGGTAGTTCTACCACTCTAACACCTGAAATCTCAAACTTAGAGGACTCCTCATTCAAGGTTGGAAAACTTTCTGTTGAGCAAAGGAAAGAAAAGATCAATAGATACATGAAGAAAAGAAATGAAAGAAACTTCAGCAAGAAAATTAAGTATGCCTGCCGCAAAACTCTGGCAGATAGCCGACCTCGGGTTCGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGAAACCAATAGAACTACTAGTAGCAATCATGAAGATGATGACGAAGAAGAAATAGTTGTGAAAGATGAAGATGACATGGTTGATTCCTCAGATATTTTTGCTCATATCAGTGGGGTGAACTCCTTCAAATGCAACTATTCCATCCACTGTTATGTTGGCGTGAATGCCCCTCCCAAATCCAAAGATGAGAGTGGGAAGAGCGGAGCAGAGCATGTAGGGCAGGTTGGCACCTTTAGGTACCAAATTGAATTTTTAATTAATTAA 1326 0.4208 MMLRLYLYHLVQDEISSPLSARIFELCNAEFFPEALPNSEVTSSTNCCYEENSSYATTNKSLTVDVENKLNSNSNTVPTPTSTTTTNNNNTTNSSNLSIIFDSQEEIDNDISASIDFSLSPSFNVPPFLPVTSQQEQFDFSSVQPQVQLPAFSVVEGFSQYPTDPVAPPLMGAPLPSVFEEDCISSVPSYVPLNPSSPCTYLSPGMQPYMPPGPLTSALSTDSSGYFGGNILLGSELQTQELEYQGENGRMYCTDSIQRVFNPPDLQALGTESQQLVPGGGSSTTLTPEISNLEDSSFKVGKLSVEQRKEKINRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGETNRTTSSNHEDDDEEEIVVKDEDDMVDSSDIFAHISGVNSFKCNYSIHCYVGVNAPPKSKDESGKSGAEHVGQVGTFRYQIEFLIN 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01588 441 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 42 367 IPR045281 GO:0009909
Phco6g01588 441 MobiDBLite consensus disorder prediction 346 365 - -
Phco6g01588 441 MobiDBLite consensus disorder prediction 71 94 - -
Phco6g01588 441 ProSiteProfiles CCT domain profile. 308 350 IPR010402 GO:0005515
Phco6g01588 441 Pfam CCT motif 308 350 IPR010402 GO:0005515
Phco6g01588 441 MobiDBLite consensus disorder prediction 346 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01588 Phco-Chr6 17995772 17999291 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco6g01588 CCT 3.8e-19 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01588 6 17995772 17999291 Phco6g01588 6 17995772 17999291 ECH