Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01549 ATGCTGGAAATGGAGAAGGATTTTGATTCCAAGCTGAAGGTTCAGGGGAATTCCTCATCTTCCAATGGTGGAGGCAATGTCCAGAGATCCAAGAGCTTTGCTTTTAGGGCTCCTCAGGAGAATTACACTATTCAGGACTTTGAATTGGGCAAGATCTATGGTGTTGGCTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACAGGAACTGTGTATGCATTGAAGATCATGGATAAAAAGTTTATTACTAAAGAGAACAAAACAGCTTATGTGAAATTGGAACGCATTGTGCTAGATCAATTGGATCATCCTGGCATTGTGCGGCTATATTTCACATTTCAAGACTCATTTTCTCTATACATGGCACTTGAATCCTGCGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGGTCGTCTAACTGAGGACGAGGCACAGTTCTATGCAGCTGAAGTTGTTGATGCTCTTGAATACATACATAATTTGGGAGTCATACACCGTGATATTAAGCCAGAGAACTTGTTACTTACAGCTGAAGGACATATTAAAATAGCCGATTTTGGGAGTGTGAAGCCTATGCAGGATAGTCAAATCACTGTCCTTCCGAATGCAGCATCTGACGACAAAGCCTGCACTTTTGTGGGAACAGCTGCTTATGTTCCTCCAGAGGTTCTTAATTCCTCTCCGGCAACTTTTGGAAATGACCTATGGGCACTTGGCTGCACATTATACCAAATGCTTTCTGGAACTTCTCCTTTTAAAGATGCAAGTGAATGGCTAATTTTTCAAAGAATTGTAGCAAGAGAACTTAGATTTCCAGATTACTTTTCTGACGAAGCACGAGACCTCATTGACCGTCTGTTGGATTTGGAACCCAGCAGGAGACCAGGTGCTGGACCTGATGGTTATGTTATTCTGAAAGCACACCCATTTTTCAAGGGGGTTGACTGGGATAACTTGAGGGCACAAATTCCTCCAAAACTTGCTCTGGAACCTGGGACTCAGTCACCTGCAGCTGATGATGTTCATGATTCATCATGGAGTCCTTCTCACATTGGGGATGGTTCTTTGGCTTCGGTTAGACAGTCTGATGCTGCTACCTCTTCTGATGGGACTGGTCACATAACTAGGCTAGCTTCAATTGATTCCTTTGATTCAAAATGGCAACAGTTTTTGGATCCTGGGGAATCTGTTCTTATGATCTCTATGGTGAAGAAATTACAAAAACTAACAAGCAAGAAGGTGCAGCTCATCCTCACCAACAAACCAAAGTTAATCTATGTGGACCCATCAAAGCTAATTGTGAAGGGAAATATAATATGGTCCGATAATCCAAATGATTTAAGCATCCAAGTGACTACGGCATCAAATTTCAAGATTTGCACACCTAAAAAGGTAATGTCGTTTGAAGATGCTAAGCAAAGAGCATGGCAGTGGAAAAAGGCAATTGAAGGACTTCAAAACCGGTGA 1476 0.4194 MLEMEKDFDSKLKVQGNSSSSNGGGNVQRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKVVRAKKKDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLYFTFQDSFSLYMALESCEGGELFDQITRKGRLTEDEAQFYAAEVVDALEYIHNLGVIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIVARELRFPDYFSDEARDLIDRLLDLEPSRRPGAGPDGYVILKAHPFFKGVDWDNLRAQIPPKLALEPGTQSPAADDVHDSSWSPSHIGDGSLASVRQSDAATSSDGTGHITRLASIDSFDSKWQQFLDPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLSIQVTTASNFKICTPKKVMSFEDAKQRAWQWKKAIEGLQNR 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01549 491 FunFam 3-phosphoinositide-dependent protein kinase 2-like 131 329 - -
Phco6g01549 491 Coils Coil 471 491 - -
Phco6g01549 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Phco6g01549 491 SUPERFAMILY PH domain-like 308 490 - -
Phco6g01549 491 PANTHER SERINE/THREONINE-PROTEIN KINASE 31 341 - -
Phco6g01549 491 FunFam 3-phosphoinositide-dependent protein kinase 2-like 45 130 - -
Phco6g01549 491 MobiDBLite consensus disorder prediction 13 29 - -
Phco6g01549 491 MobiDBLite consensus disorder prediction 1 29 - -
Phco6g01549 491 SUPERFAMILY Protein kinase-like (PK-like) 44 353 IPR011009 -
Phco6g01549 491 CDD STKc_PDK1 45 314 IPR039046 GO:0004674
Phco6g01549 491 Pfam PH domain 388 490 IPR033931 -
Phco6g01549 491 ProSiteProfiles Protein kinase domain profile. 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01549 491 Pfam Protein kinase domain 49 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01549 491 MobiDBLite consensus disorder prediction 331 352 - -
Phco6g01549 491 FunFam 3-phosphoinositide-dependent protein kinase 1 361 491 - -
Phco6g01549 491 SMART serkin_6 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01549 491 Gene3D Phosphorylase Kinase; domain 1 45 130 - -
Phco6g01549 491 Gene3D - 363 491 IPR011993 -
Phco6g01549 491 Gene3D Transferase(Phosphotransferase) domain 1 131 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01549 Phco-Chr6 16730969 16740647 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Phco6g01549 Pkinase 2e-65 CL0016