Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01456 ATGCTTTCTTCCTCCTTTGATCGACTCCACACACCGCACGCCACACCATCGATGGTCTCCAAACCTACCGACTCCGCTTCCAAACCTCGAAAACAACTTGGAGAGCCAGCAAATGATGCATTGGGAACCTTGTCGCTCAAGATAAATCAGTTGAAAAAGCAAATCCAGGCGGAGAGAATAGTATACATTAAAGAAAAAATTCAGAGTAATGAGAAGAAGCTACAATGTCATACTTCAGGAGTCCTATCGACAATGTCAGCAAGGGGTTCTTCACAGACAGAGGAAGATAGGAAAACTCCAATTCTTTCTAGAATTGACCGTCCTTTATGTAAATTCAGTGGTTTCTCTCCAGTCTCAGTGGACAAAGACCACAGCAATCAAGATGTATTATCTGCTACAAGTATCAAAATACCATATATTGAAAGATTACCGCCATATACCTCTTGGATATTTCTGGACAGAAATCAGAGAATGGCTGAAGATCAGTCAGTTGTTGGAAGAAGACGAATCTACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAAGAGTCAACAGAACATGAGGAGGAAAAACATGAATTTTCTGAGGCTGAAGATCGTGTTCTGTGGATGGCATTTGAGGAATATGGGTTAAACGAGGAGGTACTGAATATTGTTAGCGAATTTGTTGGGGGAACCAGTTCAGAAATTCAGGAGAGGTACAAAAGTATCAAGGAAAAGAACATTGGTAGGTTGGATCAGCCTTTGGAAAACTCAGGAGATTATGAATCTATTATTGGCATCTCTACAGAGAAAAGCCTGAATGCCGCATTAGATTCTTTTGATAATCTTTTTTGTCGCCGGTGCCTGATTTTTGACTGTCGTCTGCATGGCTGTTCGCAACCTTTAGTATATCCTAGTGAAAAGCAGACATTATGGTCTGATCCTGAAGGTGACAAGAAACCATGCAGTGATCAGTGTTACCTTCAGTTAAAGGAAGTCAAAGGTGTGTCAGAAGATGCAACTTCTGGGTCTGATCAGAATAAGAGAACTACAACTATTGAAGAGGCAGACGGGATATTGGCACCCTCCACTACAGAGGAACCTGGTAATCATAGTACAGCACCTTTTCCAACAGAAGTTGATTGTCATGGATCTCTCAATTTAAATGTTCCTATCTCCGTAAGTGTGGAAAAACGGAAAGTCACAAATCTGTCAGACACATCACTTTGTGACTTAATACGCCCTCCTGATGGTTCTCAAAATTCTAATAAAAAGCTGAAGACAACCTCAGATGATGTAATTACTGTAAATAGTGATTCTAGCAATAACCTTTTGGGTGCATGTGATGAAAGTAAACATACTATTACTTGTGCAATTTTGGACAAATCTTTAAAACATAATTCAAATAAAGTAATAGACTCTTCTAGCACTTGTCATACGGATGAGCAGGACAAAAGTATTGGGGATGGACCCAAAGATCCTACAAATAAGACAGAATTTAAGAAGTTGTCCAGTTCAATGGAAGGGAAAGTTGATGGGATGCCAGGTCTCTCAGATTGGAAACCCCTAGAGAAAGAATTATACTTGAAGGGAGTAGAGATGTTTGGAAGAAATAGCTGCCTCATAGCAAGGAACTTACTTTCTGGCTTAAAGACTTGCATGGAAATAACTAGCTACATGCATGCCGGAGGAGTGTCAATGCCTCACGGATCTATTGTTGCACCTAGTTCAATCATGGATGACAAGGGAAAATTTGATGCAGAGTACACAGACCAGGAGATGCCATCTAGGTCACGGTTGCTGAGGAAAAGGGGCAAAACAAGGAAGTTTAAATATTCTTGGAAGTCTACTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACACCATGCGGATGTCAGTCAATGTGTGGAAAGGAATGTACTTGTGTTAATGGTGGAACATGCTGTGAAAAATATTGCGGTTGTTCAAAAAGCTGCAAAAATCGGTTCAGAGGATGCCATTGTGCCAAGAGTCAGTGCAGAAGTCGACAATGCCCATGTTTTGCTGCAGGACGGGAATGTGATCCAGATGTTTGTCGGAATTGCTGGGTTAGTTGTGGTGATGGTTCATTAGGGGAGCCACCCCGGCGTGGAGAAGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTCTTGGCAAAGTCTGATGTTGCAGGATGGGGAGCTTTCTTGAAGAACCCTGTTAACAAAAATGATTACCTAGGAGAGTACACAGGAGAACTGATCTCCCACCGAGAAGCTGATAAGCGTGGGAAAATATATGACCGAGCCAACTCTTCTTTCCTTTTTGACTTGAATGATCAGTACGTTCTTGATGCTTATCGCAAAGGAGACAAGTTAAAATTTGCAAACCACTCGTCAAACCCCAACTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTTGCCAAGGAACACATTGATGCTAGCGAGGAACTCTTCTATGATTATCGCTATGGTCCAGATCAAGCACCGCCATGGGCACGTAAACCTGAGGGTTCCAAGAGCGACGAATCAACAGTTTATCAAGGCAGAGCAAAGAAACACCAGTCTCATTGA 2655 0.4196 MLSSSFDRLHTPHATPSMVSKPTDSASKPRKQLGEPANDALGTLSLKINQLKKQIQAERIVYIKEKIQSNEKKLQCHTSGVLSTMSARGSSQTEEDRKTPILSRIDRPLCKFSGFSPVSVDKDHSNQDVLSATSIKIPYIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEESTEHEEEKHEFSEAEDRVLWMAFEEYGLNEEVLNIVSEFVGGTSSEIQERYKSIKEKNIGRLDQPLENSGDYESIIGISTEKSLNAALDSFDNLFCRRCLIFDCRLHGCSQPLVYPSEKQTLWSDPEGDKKPCSDQCYLQLKEVKGVSEDATSGSDQNKRTTTIEEADGILAPSTTEEPGNHSTAPFPTEVDCHGSLNLNVPISVSVEKRKVTNLSDTSLCDLIRPPDGSQNSNKKLKTTSDDVITVNSDSSNNLLGACDESKHTITCAILDKSLKHNSNKVIDSSSTCHTDEQDKSIGDGPKDPTNKTEFKKLSSSMEGKVDGMPGLSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEITSYMHAGGVSMPHGSIVAPSSIMDDKGKFDAEYTDQEMPSRSRLLRKRGKTRKFKYSWKSTGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKECTCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKSDESTVYQGRAKKHQSH 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01456 884 MobiDBLite consensus disorder prediction 476 505 - -
Phco6g01456 884 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 884 IPR025778 GO:0031519
Phco6g01456 884 MobiDBLite consensus disorder prediction 1 27 - -
Phco6g01456 884 SUPERFAMILY SET domain 636 853 IPR046341 -
Phco6g01456 884 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 40 883 IPR045318 GO:0006338|GO:0042054
Phco6g01456 884 SMART set_7 735 856 IPR001214 GO:0005515
Phco6g01456 884 Pfam CXC domain 674 705 IPR041355 -
Phco6g01456 884 MobiDBLite consensus disorder prediction 856 884 - -
Phco6g01456 884 CDD SET_EZH 735 851 - -
Phco6g01456 884 ProSiteProfiles SET domain profile. 735 850 IPR001214 GO:0005515
Phco6g01456 884 Gene3D SET domain 636 852 IPR046341 -
Phco6g01456 884 ProSiteProfiles CXC domain profile. 622 721 IPR026489 -
Phco6g01456 884 Pfam SET domain 746 849 IPR001214 GO:0005515
Phco6g01456 884 SMART CXC_2 670 707 IPR033467 -
Phco6g01456 884 MobiDBLite consensus disorder prediction 1 38 - -
Phco6g01456 884 MobiDBLite consensus disorder prediction 863 877 - -
Phco6g01456 884 MobiDBLite consensus disorder prediction 471 515 - -
Phco6g01456 884 FunFam Putative histone-lysine N-methyltransferase EZH2 636 852 - -
Phco6g01456 884 Coils Coil 185 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01456 Phco-Chr6 15082873 15096347 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phco6g01456 SET 1.1e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01456 6 15082873 15096347 Phco6g01456 6 15082873 15096347 ECH
Phco2g02446 2 54532532 54545442 Phco6g01456 6 15082873 15096347 PCT