Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01453 ATGCCGCTGCTCGCCGGTTCCACCTCCTTAACCGGTGGGTTGAAATGGTTGCTTGTGTTGTTATCTTGCACGGTGTGGTTTGTGGTTGAGTATGGTGAATGTGGTAGAACACTGCAACAGGAAACTCCTTCTTTATCTCCAGCTGCTGCACCACCTGTTGTTGATGGTGATCTGCCACTATTGGCAAATGCTCTTGGATTGAAGCATTTGCCTGCACCAATTCCATCACGTGCCAATTTCACTGCAGGAAGAGAACAATTAGAACCTCCGGGTTCTGGGTTTAAGAATATTGCCCCTATGCATCCTATTGCTGATGCAATTCCTTCTGGTCTCGCTCAACCACCTTTGTCCCCTTATGTTTCTGATTGTTGCAGACAAGACATGGTGTGGAAACGAGGCAGTAAGGTTTGCCACTGTGCTTATCCCATAAAGCTAGACTTGCTTCTTTTGAATGTCTCTCCAAACCCCGACTGGAATGTTGTTTTTCTCAAAGATTTGGCCGCCCAACTTGAGCTCAACACTACCCAAATTGAAATTATTAAATTTTACCTACTGAGCTTGTCAACATTGAACATATCGATGGATATCACTCCAAATAAAGGGATCAGTTTCTCTGCCAATGAAGCCGCTAAAATTAATTCATCGCTTTTATTGCATAAGGTTCAACTAGACAGCAGATATGTGGGCAACTACAGTGTCCTCAATATAACGTGGTTTAAAGCTCCACCTCCTTCTCAAGCTCCTACAATTGCTACATCTCCTACAAAATCTCCTCACAGACAAGCACCTCCAACTTCATTATCGAGTACTTCTGACAGGGGAAGGCACTTAAACTTGCTTCTTATTCTTGGAATTGTGACTGGCGTACTCTTCATTTCCATTGTATGTGTACTTATACTTTGCTTATGCACGATGCGGCCAAAGACAAAAACACCTCCCACAGAAACTCAAAAACCAAGGACTGAAAGCACAGTTCCAGCTGTTGGGTCTCTTCCCCATCCAACCAGTACACGCTTTATTGCTTATGAAGAACTTAAAGAAGCTACAAATAATTTTGAACTAGCAAGCGTACTCGGAGAAGGAGGTTTTGGTAGAGTATATAAAGGCGTCTTGAATGATGGAACTTCTGTTGCAATTAAGAGGCTTACTAGTGGAGGGCAACAGGGTGACAAAGAATTTTTGGTTGAGGTTGAGATGCTTAGTCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGATACTATAGTAATCGTGACTCATCACAAAATCTACTTTGCTATGAGCTTGTTCCGAATGGAAGTTTGGAGGCCTGGCTTCATGGTCCCCCGGGAATAAATTGCCCTTTGGATTGGGACACTAGAATGAAGATTGCCCTTGATGCTGCAAGAGGACTTGCATACCTGCACGAAGATTCACAGCCTTGTGTTATACACAGAGATTTCAAGGCATCCAACATATTGCTTGAGAACAACTTTCATGCTAAAGTTGCAGATTTTGGTCTAGCTAAACAGGCACCTGAAGGCAGGGCAAATTATCTATCTACTCGAGTTATGGGCACATTTGGGTATGTAGCTCCTGAGTATGCTATGACTGGACATCTACTTGTTAAAAGCGACGTTTATAGTTATGGGGTTGTCTTGCTGGAACTGCTGACCGGAAGGAAACCAGTGGATATGTCACAGCCAACTGGACAAGAGAACCTTGTTACTTGGGCAAGACCTATTCTTAGAGATAAGGATCGGTTGGAAGAACTTGCTGATCCAAGGCTTGGGGGAACGTACCCAAAAGAAGATTTTGTACGTGTTTGCACTGTCGCAGCAGCCTGTGTTGCTCCTGAAGCAAGCCAGCGACCTACAATGGGCGAAGTGGTACAGTCACTTAAAATGGTGCAGCGCATCACAGAAAGTCATGATCCTGTGTTAGCCTCATCCAATGCACCGCCCAACATGAGACAGTCCTCTACCACTTATGAGTCTGATGGGACTTCTTCAATGTTTTCTTCGGGTCCTTACTCTGGTCTAAGTGCCTTTGACCATGACAACATTTCGAGGACAGCTGTTTTCTCTGAAGATCTTCATGAAGGACGATGA 2091 0.4419 MPLLAGSTSLTGGLKWLLVLLSCTVWFVVEYGECGRTLQQETPSLSPAAAPPVVDGDLPLLANALGLKHLPAPIPSRANFTAGREQLEPPGSGFKNIAPMHPIADAIPSGLAQPPLSPYVSDCCRQDMVWKRGSKVCHCAYPIKLDLLLLNVSPNPDWNVVFLKDLAAQLELNTTQIEIIKFYLLSLSTLNISMDITPNKGISFSANEAAKINSSLLLHKVQLDSRYVGNYSVLNITWFKAPPPSQAPTIATSPTKSPHRQAPPTSLSSTSDRGRHLNLLLILGIVTGVLFISIVCVLILCLCTMRPKTKTPPTETQKPRTESTVPAVGSLPHPTSTRFIAYEELKEATNNFELASVLGEGGFGRVYKGVLNDGTSVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPPGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTWARPILRDKDRLEELADPRLGGTYPKEDFVRVCTVAAACVAPEASQRPTMGEVVQSLKMVQRITESHDPVLASSNAPPNMRQSSTTYESDGTSSMFSSGPYSGLSAFDHDNISRTAVFSEDLHEGR 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01453 696 MobiDBLite consensus disorder prediction 638 670 - -
Phco6g01453 696 ProSiteProfiles Protein kinase domain profile. 352 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01453 696 Gene3D Phosphorylase Kinase; domain 1 315 429 - -
Phco6g01453 696 MobiDBLite consensus disorder prediction 250 272 - -
Phco6g01453 696 FunFam Receptor-like serine/threonine-protein kinase ALE2 430 645 - -
Phco6g01453 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Phco6g01453 696 Gene3D Transferase(Phosphotransferase) domain 1 430 644 - -
Phco6g01453 696 MobiDBLite consensus disorder prediction 245 272 - -
Phco6g01453 696 CDD STKc_IRAK 358 628 - -
Phco6g01453 696 FunFam Receptor-like serine/threonine-protein kinase ALE2 332 429 - -
Phco6g01453 696 MobiDBLite consensus disorder prediction 309 329 - -
Phco6g01453 696 SUPERFAMILY Protein kinase-like (PK-like) 328 629 IPR011009 -
Phco6g01453 696 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Phco6g01453 696 Pfam Protein tyrosine and serine/threonine kinase 353 627 IPR001245 GO:0004672|GO:0006468
Phco6g01453 696 PANTHER OS01G0750732 PROTEIN 122 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01453 Phco-Chr6 15024233 15029047 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Phco6g01453 Pkinase 9e-45 CL0016