Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01444 ATGGAGAAGAAGGAGATGGTTGTGAAAACTGAGGATGCGGTTGGGTCCTCTTCCATCCCTTGTTATAATTCAAACTTTTATCCATTCTCGAACGCGTTTGATTTCTCTGAGGTGGAAAAGAGCTCTTTAGGGTTTATGGAGCTACTGGGTGTGCAGGATTATAGTCCTCTGCTTGAGTTACCTCAACTTTCAACAGTTTCTGTGCCTCATCACTCTACAGTTAAGGTTCCATCTGATAACGGGAAAGAGTGTTCCGAGGTGTTGAACCACCAACCCGCCACTCCAAACTCTTCTTCTATTTCATCTGCATCCAGTGATGCTGTCAATGATGAACAGAAGATGACTCTAGACCAAGTTGAAGAAGATGACGATGAAGAAGAAGAAGAAGGACAACAGAAGACTAAGAAACAGTTGAAGCCGAAGAAGACAAATCGGAAGAGACAGAGAGAACCAAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAGGCCGTGAAAAACAGCCCTTTTCCCAGGAGCTACTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAGCGTGTGGAGCGATCTTTCACTGATCCAAGCGTGGTAGTCACAACCTATGAAGGCCAACACACACATCCAAGCCCAGTTATGCCTCGCTCAGGTGTCTCCGCTGGATACGCCACCAACTTTGCTTCAGTTTTTCCACAAGCAGGAAACTACTTATCACAGTATCAGCAGCAGCAGCACCACCAACAACTTATTTTTAGCACATTGTCCTCTTTGGGTTTCCCTTGCAATGACTCTTCCTCTCCAAAGAACGCTGGTTTTACTCAAGAGAGACGGCTTTGTAATCCGGGGACAAATGCATTTCTAAGGGACCATGGACTTCTTCAAGATGTTGTTCCTTCACACATGTTGAAAGAAGAGTAG 957 0.4514 MEKKEMVVKTEDAVGSSSIPCYNSNFYPFSNAFDFSEVEKSSLGFMELLGVQDYSPLLELPQLSTVSVPHHSTVKVPSDNGKECSEVLNHQPATPNSSSISSASSDAVNDEQKMTLDQVEEDDDEEEEEGQQKTKKQLKPKKTNRKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSFTDPSVVVTTYEGQHTHPSPVMPRSGVSAGYATNFASVFPQAGNYLSQYQQQQHHQQLIFSTLSSLGFPCNDSSSPKNAGFTQERRLCNPGTNAFLRDHGLLQDVVPSHMLKEE 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01444 318 MobiDBLite consensus disorder prediction 71 150 - -
Phco6g01444 318 MobiDBLite consensus disorder prediction 84 112 - -
Phco6g01444 318 FunFam WRKY transcription factor 57 150 224 - -
Phco6g01444 318 SUPERFAMILY WRKY DNA-binding domain 156 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco6g01444 318 Pfam WRKY DNA -binding domain 165 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco6g01444 318 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 87 257 IPR044810 GO:0003700
Phco6g01444 318 Gene3D WRKY domain 149 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco6g01444 318 SMART WRKY_cls 164 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco6g01444 318 Coils Coil 109 136 - -
Phco6g01444 318 ProSiteProfiles WRKY domain profile. 159 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco6g01444 318 PIRSF WRKY_txn_fact_IIc 1 318 IPR017396 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01444 Phco-Chr6 14813090 14814766 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco6g01444 WRKY 2.9e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01444 6 14813090 14814766 Phco6g01444 6 14813090 14814766 ECH
Phco2g02458 2 54657972 54659299 Phco6g01444 6 14813090 14814766 PCT