Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01370 ATGGGAAGGCACTCTTGCTGTTACAAGCAGAAACTTCGCAAGGGTCTTTGGTCCCCTGAGGAGGATGAAAAACTTCTGAGGCATATTACCAAGTATGGTCATGGATGTTGGAGTTCTGTGCCTAAGCAAGCAGGTTTGCAAAGGTGTGGTAAGAGCTGCAGGCTTAGGTGGATCAATTACCTTAGACCTGATTTAAAGAGAGGAACATTCTCACAAGAAGAAGAAAACCTTATAATTGAACTTCATGCAGTATTAGGGAACAGGTGGTCTCAAATTGCGGCACAGTTGCCGGGGAGGACTGACAATGAAATAAAGAATCTGTGGAACTCTTGCTTGAAGAAGAAACTGAGGCAAAAAGGCATAGACCCTGTCACACATAAACCACTGTCCGAGATTGAGAATGGAGATGACACTGGTAAGAGCCAAGGTAAAGCACCGGAAGTGTCCAATGAATTGAACCTCCTGAAATCAGAGAGCTCCAAGTCAGATTCAGCTTCCTATGAGCAGAGAACATCAATTTCTCCAAAAGCCTATTTACCCGAGATGGATGGTTCCTGCAGCTCCAAGATTTACTGCAGAAGTGACAGCAATTTCGTAGCCAACAACTGTTACAGCAAAGACTTGTTCCTAGACAGGTTTATGAATAGTAGCCGCCAAGAGAGCTACACCACTAGTTGCCAGCCCTCAGATTTGATGGGAAATTTTCCAATTCAGATGAGTTATGCAACCAATGACTGTCTCCCTAATGATTCAAACTCTAGTCATTGGTTCAGCCAAACTGGAAGGCCTTTCGATATGAACTCTGAATTTCCTTTCAATGCTGCCACTTCCATGAATCATCCTACACCTACAACCAATTTGTTTCTTCCTAATTCTTTCAGCTACAAGCCTTCACTTGCTGTTCCTTCTGACAGTGTTTCTACAGCCTATGGATCTCATTACTGGGAAGCCAGTGCCTCCAACAATAGCAATAGCAGCATTAGGAGTAATAGCAGCACTGAGTTGAGAGGTAGCAGCCCCTTAAACATCTTTTCTTCTTGGGGATTGCCAGAATGCAGCACCTCTACTACCAAAGAGGGACAAATTCATATGATGGAGAATCATACAGAAGAAGCTAAGTGGGATGAGTACCTTCACAATCCAATCTCAATGCTGGCTTCTGCACAAAATCAAGCTCCTGAATCCTTATGCAACGAGATAAAAACATCCATGCATTTGGTACCTGATACTTTAGGGGCTATGTTACCTCACAGCACCAAGCAGCAAGAACCGTCTCAAACCTCTACTATCTTTTCCAAGGACATCCAGAAGCTCAGGGCAGCCTTTGGACACATGTAA 1338 0.4387 MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQKGIDPVTHKPLSEIENGDDTGKSQGKAPEVSNELNLLKSESSKSDSASYEQRTSISPKAYLPEMDGSCSSKIYCRSDSNFVANNCYSKDLFLDRFMNSSRQESYTTSCQPSDLMGNFPIQMSYATNDCLPNDSNSSHWFSQTGRPFDMNSEFPFNAATSMNHPTPTTNLFLPNSFSYKPSLAVPSDSVSTAYGSHYWEASASNNSNSSIRSNSSTELRGSSPLNIFSSWGLPECSTSTTKEGQIHMMENHTEEAKWDEYLHNPISMLASAQNQAPESLCNEIKTSMHLVPDTLGAMLPHSTKQQEPSQTSTIFSKDIQKLRAAFGHM 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01370 445 MobiDBLite consensus disorder prediction 123 140 - -
Phco6g01370 445 PANTHER MYB DOMAIN PROTEIN 55 1 359 - -
Phco6g01370 445 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phco6g01370 445 Gene3D - 68 135 - -
Phco6g01370 445 SMART sant 13 63 IPR001005 -
Phco6g01370 445 SMART sant 66 114 IPR001005 -
Phco6g01370 445 FunFam MYB transcription factor 68 140 - -
Phco6g01370 445 MobiDBLite consensus disorder prediction 123 148 - -
Phco6g01370 445 FunFam Myb transcription factor 11 67 - -
Phco6g01370 445 CDD SANT 17 61 IPR001005 -
Phco6g01370 445 Gene3D - 11 67 - -
Phco6g01370 445 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phco6g01370 445 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Phco6g01370 445 CDD SANT 69 109 IPR001005 -
Phco6g01370 445 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phco6g01370 445 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phco6g01370 445 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Phco6g01370 445 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01370 Phco-Chr6 13795986 13797553 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phco6g01370 Myb_DNA-binding 2.1e-14 CL0123