Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01318 ATGGGTACTGATCTCAAAGAAGAATTGTCCGTGAAAACTCCTGTTTTTGATCTTAAGGTTTGGGAAATAATTGGAATTGCGGTTGGATTGTTTATTATTGTCATCCTATGTGTGCTCTCATTTTGCCTTACATCAAGGAAGAAATCTAGAAAAGCCAGGGATCGGGTTGTTAGTCATATACCTACTGTCTCAAAGGAAATCACAGAAGTGCGAGTTGAGCAAGTGCCGGCGAATGGATTTGTTCCTCGTGAAGGAATACTTCTGACAATTCATGATAAATCCAGTGACAAAGAATCAGACAAAGTTATGCTCCATTTAGGTGTTGGGAAGAAGAAGCATGGGGATAGTGGCAGTCACTCGGATTCGTTTCATTACTTAGAGAAAGATGGTGGAGGGTCACAATCAGGGGAGGAGATTAGCTCCGGCTCGGTTGGAATGTACATGCCATCTTCGTCATACCCTATAACAGCTCCTTCACCTCTCTCTGGCCTTCCAGAATTCTCTCACTTGGGTTGGGGTCACTGGTTTACTCTGAGGGATCTCGAACTTGCTACAAACCGTTTTTCAAAAGAAAATGTAATTGGTGAGGGTGGGTATGGAGTTGTTTACCGGGGACAGTTGATCAATGGGACTCCAGTGGCAGTTAAGAAGATACTCAATAACATTGGTCAAGCCGAGAAAGAGTTTAGAGTGGAAGTGGAAGCTATTGGCCATGTCCGGCATAAAAATTTGGTTCGACTTTTGGGGTACTGCATGGAGGGGACTCACAGGATGTTAGTCTATGAATACGTCAGTAACGGAAATTTAGAGCAATGGCTTCACGGAGCTATGCGACATCATGGATATCTAACCTGGGAAGCACGTATCAAGATTCTCCTTGGCACAGCTAAGGGGCTTGCATATTTGCATGAAGCGATTGAGCCAAAGGTGGTGCACCGAGATATCAAGTCAAGCAACATATTAATTGATGAAGACTTTAATGCAAAGGTTTCTGATTTTGGCCTGGCCAAGTTACTGGGTTCTGGGAAGAGTCATGTTGCTACACGAGTTATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAATACTGGTCTTCTAAATGAAAAAAGTGATGTTTATAGCTTTGGTGTTGTGCTATTGGAAGCAATTACCGGAAGAGATCCAGTTGACTATGGTCGCCCAGCACAGGAAGTTAATATGGTTGATTGGCTGAAGATGATGGTTGGAAACAGGCGATCGGAAGAAGCGGTGGATGCAAACATTGAGGTGAAGCCATCTACCAGGACTTTGAAACGGGCGCTCTTAACTGCTTTGAGATGTGTAGATCCAGATTCAGAGAAAAGACCCAAGATGGGTCAAGTTGTGCGTATGCTTGAGTCAGAGGAGTACCCTTTAGCTAGAGAGGACCGTAGGCATCGAAGAAATCATGGGGTTAACTCAGAAATTGAATCCCATAAGGATAGTTCTGACACGGATGGGAGTGACATTCAGGGTTCTAGATCAGAAAGTGGAAGATTCTTGGATTTGCCTACCCGAGATGGGCATGGCAGAGGCTGA 1560 0.4429 MGTDLKEELSVKTPVFDLKVWEIIGIAVGLFIIVILCVLSFCLTSRKKSRKARDRVVSHIPTVSKEITEVRVEQVPANGFVPREGILLTIHDKSSDKESDKVMLHLGVGKKKHGDSGSHSDSFHYLEKDGGGSQSGEEISSGSVGMYMPSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVIGEGGYGVVYRGQLINGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCMEGTHRMLVYEYVSNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKGLAYLHEAIEPKVVHRDIKSSNILIDEDFNAKVSDFGLAKLLGSGKSHVATRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPAQEVNMVDWLKMMVGNRRSEEAVDANIEVKPSTRTLKRALLTALRCVDPDSEKRPKMGQVVRMLESEEYPLAREDRRHRRNHGVNSEIESHKDSSDTDGSDIQGSRSESGRFLDLPTRDGHGRG 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01318 519 Gene3D Transferase(Phosphotransferase) domain 1 264 476 - -
Phco6g01318 519 CDD STKc_IRAK 194 460 - -
Phco6g01318 519 PANTHER OS01G0323000 PROTEIN 5 485 - -
Phco6g01318 519 Gene3D Phosphorylase Kinase; domain 1 170 263 - -
Phco6g01318 519 ProSiteProfiles Protein kinase domain profile. 188 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01318 519 FunFam Putative receptor-like protein kinase 170 263 - -
Phco6g01318 519 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Phco6g01318 519 MobiDBLite consensus disorder prediction 111 143 - -
Phco6g01318 519 Pfam Protein kinase domain 189 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01318 519 SUPERFAMILY Protein kinase-like (PK-like) 172 468 IPR011009 -
Phco6g01318 519 MobiDBLite consensus disorder prediction 111 126 - -
Phco6g01318 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Phco6g01318 519 FunFam Putative receptor-like serine/threonine-protein kinase 264 475 - -
Phco6g01318 519 MobiDBLite consensus disorder prediction 467 519 - -
Phco6g01318 519 SMART serkin_6 188 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01318 519 MobiDBLite consensus disorder prediction 467 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01318 Phco-Chr6 13278334 13282295 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Phco6g01318 Pkinase 6.2e-49 CL0016