Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01180 ATGAACCATTCGAACGGGTGGACCAGCTCCTCCTTCTCTATCTTACCCCACTTGAATGAACTTCAAGAAACCACAGACCCCAGTAAGAGCACTCAAAACTTGGATAGCTTAACCACTAATCCTAAGAGGCGCAGAGCCAAAAGCAGAAAGAACAAGGAAGAAATTGAGAACCAAAGAATGACTCAAATTGCTGTGGAAGGCAATAGAAGAAAGCAGATGAATGAGTATCTTTCTGTTCTTCGCTCTCTCATGCCAGACTCTTATATTCAAAGGGGTGATCAAGCTTCTATAATTGGAGGTGCTATTAACTTTGTCAAGGAGCTTGAGCAGAGGCTGCCTTTTCTTGGTGCTCAGAAAGAAGGAGAGGGGAAATCTGATGCTGGTGGTGAATACGTGGGTGAAGTTAAGTATGGCATTGTTGACATAGAAGTGACCATGGTGGAAAGCCATGCAAATCTCAAAATAAGATCCAAGAAGCGCCCCAAGCAACTCTTGAAGTTGGTAAAAGATGATTGCAAGTTGGGATCCTTTGATGATATAGCTGAAGCTGTGTACCAGACGCTGGATAGGATTCAGCAAGAGGCAGTGTTGAATCTTATAAGCTACCCTTATAAGATTTGA 621 0.43 MNHSNGWTSSSFSILPHLNELQETTDPSKSTQNLDSLTTNPKRRRAKSRKNKEEIENQRMTQIAVEGNRRKQMNEYLSVLRSLMPDSYIQRGDQASIIGGAINFVKELEQRLPFLGAQKEGEGKSDAGGEYVGEVKYGIVDIEVTMVESHANLKIRSKKRPKQLLKLVKDDCKLGSFDDIAEAVYQTLDRIQQEAVLNLISYPYKI 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01180 206 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 57 108 IPR011598 GO:0046983
Phco6g01180 206 MobiDBLite consensus disorder prediction 23 39 - -
Phco6g01180 206 Pfam Helix-loop-helix DNA-binding domain 58 109 IPR011598 GO:0046983
Phco6g01180 206 Gene3D - 39 121 IPR036638 GO:0046983
Phco6g01180 206 SMART finulus 63 114 IPR011598 GO:0046983
Phco6g01180 206 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 57 120 IPR036638 GO:0046983
Phco6g01180 206 PANTHER MAX DIMERIZATION, MAD 15 195 - -
Phco6g01180 206 MobiDBLite consensus disorder prediction 23 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01180 Phco-Chr6 11866104 11867133 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phco6g01180 HLH 1.2e-06 No_clan