Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01138 ATGCCCATGGCATCCGATCTAAACGACGCCGTTTTCCCCGAAGAAGATCTTGATGATGACGATGAAACTCAAGAGGACGAAGAGGAGGATGACGAAGACGACGACGTTTTAGACGATGACGAACCCCCTCACTCCGTCCTCGCCGCCGTAACCCTCGCCGCCCCCGGTTCCAACGTCTCCCAAACACTCGGCACCGCATCAACTTCGATCGTTGTCGCCGATTCCTCCCCGAAGAGGCCGCGCACGGAGCAAATCGAGGAGAAAAAGGCGCTGGACGATTCGCGGAGATTGTTCCAGCGTCTGTGGACGGACGAGGACGAAATTGGACTATTGCAGGGGTTTCTGGACTACACAGCGCAGCGAGGATCCTCTCACCACAACGACACCGCTTTGTTCTACGACCAGATCAAGTCGAAGCTTCAACTCGGTTTCAACAAGAACCAGCTGGTCGAGAAGCTCCGAAGGCTGAAGAAGAAGTACCGCAACGTCGTCACCAAAATCAGCGATGGCAAGGAAGTCTCCTTCAAGAGCCCTCACGACAAAGCCACCTTCGAAATCTCGCGGAGGATCTGGAGCAACACCGCTCCAATCACCGGTCCCGTCGAAGACGACGACGAAATCAACCCTAACCCTAATTCTAATCCAAATCCCAACCCTAATTTCGGCCAATCGGCGAAGACGCCGGTGTCGCGGAAGCGGTCGCGGCCTCGATCGGAGAAGCGCGAGTTCAACGACGGTTCAGCCTTGAACAAGGATACTAATTGTATTGGCAACAGTAACAATAATAGTAATAAAGATAATGAAAATTGTAACCATAGGCATAACTTACAGGGTTTGATTGAAGAGACAGTGAGGAGTTGTGTATCGCCGGTGTTGAAGGAGTTGGTGAGTGGTGGCATGGGATTGGGAAGTGGTTTTAGTTTTGGGGGAAGAGGTTTTGGAGTTGGAGGAGGGTTTTCAATGAATCCCTTGCAAATGCCAATGACATTGAGTCCATTGAATTTGGGCATTGGGGAAATGGGGATGGATGAGAAGTGGAGGAAGCAACAGATTTTGGAGCTAGAAGTATATTCGAAGCGTTTGGAATTGGTGCAGAATGAGATAAAGGTTGCTCTGGAGGAGTTGCGATCAACCGGTGGAGGATGA 1146 0.5122 MPMASDLNDAVFPEEDLDDDDETQEDEEEDDEDDDVLDDDEPPHSVLAAVTLAAPGSNVSQTLGTASTSIVVADSSPKRPRTEQIEEKKALDDSRRLFQRLWTDEDEIGLLQGFLDYTAQRGSSHHNDTALFYDQIKSKLQLGFNKNQLVEKLRRLKKKYRNVVTKISDGKEVSFKSPHDKATFEISRRIWSNTAPITGPVEDDDEINPNPNSNPNPNPNFGQSAKTPVSRKRSRPRSEKREFNDGSALNKDTNCIGNSNNNSNKDNENCNHRHNLQGLIEETVRSCVSPVLKELVSGGMGLGSGFSFGGRGFGVGGGFSMNPLQMPMTLSPLNLGIGEMGMDEKWRKQQILELEVYSKRLELVQNEIKVALEELRSTGGG 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01138 381 MobiDBLite consensus disorder prediction 207 229 - -
Phco6g01138 381 MobiDBLite consensus disorder prediction 248 266 - -
Phco6g01138 381 Coils Coil 347 374 - -
Phco6g01138 381 Pfam Protein of unknown function, DUF573 98 192 IPR007592 GO:0006355
Phco6g01138 381 Coils Coil 146 166 - -
Phco6g01138 381 PANTHER BNAANNG10740D PROTEIN-RELATED 5 374 IPR007592 GO:0006355
Phco6g01138 381 MobiDBLite consensus disorder prediction 11 40 - -
Phco6g01138 381 MobiDBLite consensus disorder prediction 1 46 - -
Phco6g01138 381 MobiDBLite consensus disorder prediction 195 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01138 Phco-Chr6 11441432 11442577 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Phco6g01138 DUF573 8.5e-34 CL0123