Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01137 ATGCACAGGTGCCATGAACCAACCAACGGCTACCTTCATACTCTAATATGCGGAAAAAGGAAGTGTGATGTCTCCTCAAAAATGCTTTCCCCTTTGGTTTCTTGGTTCTTGTCCCCCTCCTCTTCCTCCTCCTCTTCCGAAGAAGAACAAAACCTTCCCATTAACACTCATGATCACACTAACCATGAAAACCATCAAAACTTCAACATACAAGATCACGAGAACGACCAATATCTGAGCTCATGCGATGTGGATGATACCATTCCCGTTGCTCTCGCCGTTCCCACTGCCTCCCCTGCCGTGACGGTGGCCTTCCCGGCCGACGATGAAAGAAGCATGGTCCCCGGCACCACCACCACTGCCACCACATTTGTAACGCGCTCCAAAGGGCAGTGCTCCAACAAGTATTCGGGCATTGTGAGACAATATCAGAGGCTGTGGACGAAAGAGGACGAGATGGAACTGTTGAAGGGATACCTTGATTACATGAAGCAGCATGGGAGGGCAACCACCACCCTCCAAAACGACGTAGCCTCGTTGTATAATCACGTGAGGCCCAAACTGAACGTCGATTTCAACAGGAATCAGCTTGTTGAGAAGCTGCGTAGACTAAAGAGGAAACACAAATTGGCTTTGGACAAAGGCAAGGACAAGGAGGTTCCCTTTAGGAATCCCCAGGAACAGGCCATTTTCGAAATTTCACATAAGATCTGGGGCAATGACACCGATAACATGTTAGATCAAGATTCTTTTGATGGTGGGTCAGGACGCACTCCTGAAAGTCGTTACCTTAGTGGCAACGTTAAGGTGAAAATTGATCAGCTTGACAACAGTGATGAAATAGACGAGAGAGAGCCAAAGCGGTTGAGGCTACATGATGCAGAAGATGAGAACAGAGATTATGAGCAGAACAATGGTGGTAGCATACAGGGCTTCATTGAGGAGACCATGAGGTCCTGTTTCTCCCCATTGCTGAAGGAAGTGTTGGATGAAGCACACCAACAGCCACCTCCTGAGTTGGTGCCAATCCCATTGCCGCTATATCCTGAGGATGTGGACCATGAGAAATGGAGAAAACGAGGGATTTTGGAACTGGAGGTGTATTTGAAGCGGTTGGAGTTGTTGCAGGATCAGATGAAGGCTAGATTGGAGGAATTGCGATCTAGATAA 1170 0.4795 MHRCHEPTNGYLHTLICGKRKCDVSSKMLSPLVSWFLSPSSSSSSSEEEQNLPINTHDHTNHENHQNFNIQDHENDQYLSSCDVDDTIPVALAVPTASPAVTVAFPADDERSMVPGTTTTATTFVTRSKGQCSNKYSGIVRQYQRLWTKEDEMELLKGYLDYMKQHGRATTTLQNDVASLYNHVRPKLNVDFNRNQLVEKLRRLKRKHKLALDKGKDKEVPFRNPQEQAIFEISHKIWGNDTDNMLDQDSFDGGSGRTPESRYLSGNVKVKIDQLDNSDEIDEREPKRLRLHDAEDENRDYEQNNGGSIQGFIEETMRSCFSPLLKEVLDEAHQQPPPELVPIPLPLYPEDVDHEKWRKRGILELEVYLKRLELLQDQMKARLEELRSR 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01137 389 Coils Coil 365 389 - -
Phco6g01137 389 Pfam Protein of unknown function, DUF573 144 239 IPR007592 GO:0006355
Phco6g01137 389 PANTHER BNAANNG10740D PROTEIN-RELATED 39 385 IPR007592 GO:0006355
Phco6g01137 389 Coils Coil 194 214 - -
Phco6g01137 389 MobiDBLite consensus disorder prediction 39 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01137 Phco-Chr6 11436516 11437685 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Phco6g01137 DUF573 3.4e-26 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01381 11 10427216 10428439 Phco6g01137 6 11436516 11437685 PCT