Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01121 ATGGCGAAAGAGCTTCTTCTGCAACTTCGTCTACTGCTTCTTCTTCCCGAACAACGCTTCACCTTGCTTCTCGCACCCACCGACTCACTCAACTCAGGGGTGGGAATTCTCATAATTGATGACATGGAGCAGTATGAAATACTTGAGCAAATTGGAAAAGGTGCTTTTGGTTCTGCGCTTCTTGTGAGACATAAGCATGAAAAGAAACAATATGTGTTGAAGAAGATTCGCCTTGCTCGTCAAACCGAGCGCTCTCGCAGATCTGCACACCTGGAGATGGAGCTCATCTCTAAATTAAGAAACCCATTCATTGTGGAGTACAAAGATTCATGGGTTGAAAAGGGTTGCTATGTCTGCATCATTATAGGTTATTGTGAGGGAGGAGATATGGCGGAAGCTATAAAGAAAGCTAATGGTGTCCTGTTTCCTGAGGAGAAACTTTGTAAGTGGCTCGTTCAACTTCTTATGGCTCTTGAATACTTGCACATGAACCACATTCTTCACCGTGATGTGAAGTGTTCAAATATCTTCTTGACAAAAGATCATGACATACGGCTTGGTGATTTTGGACTTGCCAAAATGTTGACTTCTGATGATCTCGCTTCCTCTGTTGTGGGAACTCCTAGCTACATGTGCCCTGAGCTCCTTGCTGATATACCTTATGGTTCTAAATCAGATATTTGGTCCTTGGGATGCTGTATATATGAAATGACAGCGCATAAGCCTGCATTCAAAGCATTTGATATACAGGCATTGATTAACAAGATTAATAAATCGATAGTGGCTCCACTGCCTACAAAATATTCTAGTTCATTTCGAGGCCTTGTTAAAAGTATGCTGCGGAAAAATCCAGAGCTTAGGCCCAGTGCTACAGAGCTGCTTGGACATCCACATCTTCAACCTTACGTTCTTAAGGTCCATCTCAAAATCAATAGCCCCAGGCGAAGCACATTGCCAGTTCATTGGCCAGAATCGAAGTACTTGAAGAAAACCAGATTTTTGGTGCCCGAAGATGACCCTGTTTCTATGTATAGGGATAAGCGACATTCTTTCAGAAATGATCGGACTCTAAATCCTAGTGTATCCGGAGCTGATCAAGATTCTGTGTGCTCTACCCTTGAAATAGATTGTACTCCTGACCATTTGAATCAAAGATTAGCAGAACTACGTATTGGAGATAGCCATGAAGTGAAATCAATCCGGAAGCCTGCTGTCTCCAGAACTTCTAGCATTGCTAAGACTCCAAGATTCACTTCCTCAAAAGTCTCTGCTGCCAGCAAGAAAACTATGAAATCCTCAAAGAATCATAAGATGCCCCTTTCACACAGTACCACAAAATCTGCTAATACTAACCGAAGAGCATCATTTCCATTGCCAACAAGAGGTGGTATTCGGCAGCCTCCTTGCGGGCCCAATGCCACTATTATTAGTCACGTGTCTTCACCTGATATCTCAGTCAATTCTCCACGAATTGATAAGATGGCTGAATTCCCGTTAACTTCATATGTGGATTCTTTGTTCCCCAACAATAGAACATCATCCTTTGCTCAAGGTTCCTCAGGCCTCCCATCCAGTGGCAACCATTCGACTGTGATAGACAAATGCACGGTAGAGGTACATGATAGAGCCTCAAACAGACCTGACTGTACTGATTCTTGGCAGGGAATCAAGCAGAGCGTGTTAAAGGAAATTGATGAGGATAAAAGTGGTTCCTCTGATCAAAATGCAACAGCAGGTGCTTCAAGCCACACATCTTCTGACTTGCGCCGTCGACAATTTGACCCGTCATCATTCCAACAAAGGGCTGAAGCTTTAGAAGGGTTGCTTGAATTTAGTGCAAGATTGCTACAGCAGGCAAGGTATGATGAACTTGGGGTTCTATTGAAACCATTTGGGCCTGGAAAGGTTTCCCCAAGGGAAACAGCTATCTGGTTGAGTAAGAGCTTCAAAGAAAATACTTTCAACCCAGAAGAATCCATGTAA 1983 0.4322 MAKELLLQLRLLLLLPEQRFTLLLAPTDSLNSGVGILIIDDMEQYEILEQIGKGAFGSALLVRHKHEKKQYVLKKIRLARQTERSRRSAHLEMELISKLRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVLFPEEKLCKWLVQLLMALEYLHMNHILHRDVKCSNIFLTKDHDIRLGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTAHKPAFKAFDIQALINKINKSIVAPLPTKYSSSFRGLVKSMLRKNPELRPSATELLGHPHLQPYVLKVHLKINSPRRSTLPVHWPESKYLKKTRFLVPEDDPVSMYRDKRHSFRNDRTLNPSVSGADQDSVCSTLEIDCTPDHLNQRLAELRIGDSHEVKSIRKPAVSRTSSIAKTPRFTSSKVSAASKKTMKSSKNHKMPLSHSTTKSANTNRRASFPLPTRGGIRQPPCGPNATIISHVSSPDISVNSPRIDKMAEFPLTSYVDSLFPNNRTSSFAQGSSGLPSSGNHSTVIDKCTVEVHDRASNRPDCTDSWQGIKQSVLKEIDEDKSGSSDQNATAGASSHTSSDLRRRQFDPSSFQQRAEALEGLLEFSARLLQQARYDELGVLLKPFGPGKVSPRETAIWLSKSFKENTFNPEESM 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01121 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Phco6g01121 660 CDD STKc_Nek 44 299 - -
Phco6g01121 660 Pfam Protein kinase domain 45 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01121 660 MobiDBLite consensus disorder prediction 415 429 - -
Phco6g01121 660 SUPERFAMILY Protein kinase-like (PK-like) 42 345 IPR011009 -
Phco6g01121 660 FunFam Serine/threonine-protein kinase Nek2 42 124 - -
Phco6g01121 660 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Phco6g01121 660 Gene3D Transferase(Phosphotransferase) domain 1 125 313 - -
Phco6g01121 660 MobiDBLite consensus disorder prediction 436 456 - -
Phco6g01121 660 Gene3D Phosphorylase Kinase; domain 1 27 124 - -
Phco6g01121 660 MobiDBLite consensus disorder prediction 415 467 - -
Phco6g01121 660 FunFam Serine/threonine-protein kinase Nek3 127 373 - -
Phco6g01121 660 MobiDBLite consensus disorder prediction 564 597 - -
Phco6g01121 660 MobiDBLite consensus disorder prediction 571 586 - -
Phco6g01121 660 ProSiteProfiles Protein kinase domain profile. 45 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01121 660 SMART serkin_6 45 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01121 660 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 42 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01121 Phco-Chr6 11269806 11276628 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Phco6g01121 Pkinase 5.5e-64 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01121 6 11269806 11276628 Phco6g01121 6 11269806 11276628 ECH
Phco11g01369 11 10347999 10354831 Phco6g01121 6 11269806 11276628 PCT