Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01106 ATGCACACCCGTGCCAGTCTCTTGCTCCTCTTTTGTTTCCCCGTTTTGTTAAACGCCGCTCCCTCCTCCGACAATTCTGCCGGCGACTCCTTCTTGCTGGGATGCGGGTTGGGCAAAGAAGGTGGCAAAGACAGCGACGGAAGACAATGGACCCCCGACGATAAGTACCTCTCAGAGGCCAATTCCCTCACCTTCAAAGCCTCTTTCCAAGACCCTTCGCTTTTGTCCGAGGTTCCATACATGACAGCACGAATTTTCACAGCCCAAGCCTCCTACAAGTTCCCCATTCAAGGCAACAAACGTTACTGGCTCAGGCTCCATTTCTACCCCTCCGTTTACAACACCTACGACCCCGTTCACTCTTACTTCTCCGTCACAGCAAACGGCCTCAAGCTTCTTTCCAACTTCAGCGCCTCCATCACGTGCCAAGCCCTCTCACAAGCCTATCTCGACCGCGAGTATTCCCTTGCGCCTATCGACTCCGACACTCTCACCGTCACCTTCACGCCCTCTGACAAACACGATGGAGCTTTTGCTTTTGTTAATGGCATTCAGCTCATCCAAATGCCTGAGTTGTTTGACGAGGCTCCCTTGGTGGGTTTCGATGACCAAACCATGGATACCAAGACTTTGCATTTTCAGACCATGTTCAGGTTAAATGTTGGAGGACAATACATACCTCCAAATGAAGATTCTGGTCTAACCAGAATGTGGTACGATGACAGGCCTTATATTTATGGTTCTGCCACTGGTGTCACTAACCAAGCTACCAAGGAAGAAAAAATCAACTACAAAACCCTTCCACAGTCCATTGCTCCTCCCAATGTCTACTCCACTTCCCGATCCATGGGAGGCAATAAGAATCTCAACATGGGCTACAATCTTACGTGGCTATTCCAAATTGATCCGGATTCTATGTATCTTGCCCGGTTGCATTTCTGCGAATATCACTATTCCAAATTGAATGAGATTGTTTTCAAAGTCTACATCAACAACCTCACAGCGGAGACTAGTGCTGATGTGATTGGGTGGTCAGGAGGTAAAGGAGTGCCAACTTACAAGGATTATGTAATATATGTGAAAGATGGGCCAGGCGATGATAAACTCTGGCTAGCTTTGCACCCTGCACCTGAAACAAAGCCAGAATTTTATGATGCGTTACTCAATGGGGTGGAGGTGTTCAAGCTCAATGACACAGATCTGTCTGGTCCCAATCCTCAGCCTTCTGACATGCTGGTTAAACATGAGCGCGAGGAAAAGGCTTTCCAAAGCAAACCTGGGATTAGTAGGACTTTTTTTATTAGCAGTGCTGCTGGGGGTGCTGCAGGTTTTGCCTTGGTGGCTGCAATAATTGGTGTTGCTCACCATAATAGAAAGAGAGTTCCGGGATCAACCACCCCCTCGTCTAGCTGGCTGCCTCTTTATGGCAATTCCCACACCGCAGGCGCCAAATCCACAGGATCAGGGAAGAGTGTGGGCAATTCCAACCTATCTGCCATGGCTCAAGGACTGTGCCGCTATTTCTCCTTACAAGATATGAAGCACGCAACTAAGAATTTCGACGAGTCTAACGTGATAGGGGTGGGAGGGTTTGGAAAGGTTTATAAGGGTGTTATTGATAATGGGTTTAAAGTAGCAATTAAAAGATCGAACCCGCAATCAGAACAAGGAGTGAACGAGTTCCAGACCGAGATCGAGATGCTGTCCAAGTTGAGACACAAGCATTTGGTGTCCTTGATTGGTTTTTGCGAGGAGGAGAACGAGATGTGTCTGGTTTATGACTACATGTCTCTTGGCACCATGAGGGAACATCTTTACAAGGGAAGCAAGCCATTGGACATGCTAACATGGAAGCAAAGGTTGGAGATCTGCATAGGAGCCGCAAGAGGCCTTCACTACCTTCACACGGGAGCAAAATACACCATCATTCATAGAGATGTCAAAACAACCAACATTCTCCTTGATGAAAACTGGGTTGCCAAGGTTTCAGATTTTGGACTGTCCAAAACAGGTCCAAACATGAATCAAGGTCATGTTAGTACTGTGGTGAAGGGTAGCTTCGGATACTTGGATCCCGAATATTTCAGGAGGCAACAGTTGACTGAGAAATCTGATGTATACTCGTTTGGAGTTGTGCTGTTTGAGGCCCTTTGTGCAAGGCCTGCTCTCAATCCTAGCCTTCCGAAGGAACAGGTAAGCCTTGCGGAATGGGCAATGTACAACAAAAGAAGAGGAACACTTGAGGACATCATTGACCCCAGCATCAAAGGGAAGATCAACCCTGGAAGCTTGACCAAGTTTGCTGATGCAGCTGAGAAGTGTGTATCTGATCTTGGATTCGAACGACCCTCCATGAATGACCTCTTGTGGAATCTCGAATTCGCTCTCAACTTGGAAAAAAACCCCGATGGTTCAACTGCGCCAAGTCCGGACGAAAGTGAGTTCTCAGAAGTAACCTTGGAAAACAATGGCATGGCAGCTCATTACAAAAACCTTAGCATTGAAAATGAGAAAGGGCTTAGACAAGACTTTGGTAATGATAATTCTGCTGTCATCTTCTCGCAAATTGGCAATCCAACAGGACGATGA 2589 0.4712 MHTRASLLLLFCFPVLLNAAPSSDNSAGDSFLLGCGLGKEGGKDSDGRQWTPDDKYLSEANSLTFKASFQDPSLLSEVPYMTARIFTAQASYKFPIQGNKRYWLRLHFYPSVYNTYDPVHSYFSVTANGLKLLSNFSASITCQALSQAYLDREYSLAPIDSDTLTVTFTPSDKHDGAFAFVNGIQLIQMPELFDEAPLVGFDDQTMDTKTLHFQTMFRLNVGGQYIPPNEDSGLTRMWYDDRPYIYGSATGVTNQATKEEKINYKTLPQSIAPPNVYSTSRSMGGNKNLNMGYNLTWLFQIDPDSMYLARLHFCEYHYSKLNEIVFKVYINNLTAETSADVIGWSGGKGVPTYKDYVIYVKDGPGDDKLWLALHPAPETKPEFYDALLNGVEVFKLNDTDLSGPNPQPSDMLVKHEREEKAFQSKPGISRTFFISSAAGGAAGFALVAAIIGVAHHNRKRVPGSTTPSSSWLPLYGNSHTAGAKSTGSGKSVGNSNLSAMAQGLCRYFSLQDMKHATKNFDESNVIGVGGFGKVYKGVIDNGFKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEENEMCLVYDYMSLGTMREHLYKGSKPLDMLTWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNQGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPSLPKEQVSLAEWAMYNKRRGTLEDIIDPSIKGKINPGSLTKFADAAEKCVSDLGFERPSMNDLLWNLEFALNLEKNPDGSTAPSPDESEFSEVTLENNGMAAHYKNLSIENEKGLRQDFGNDNSAVIFSQIGNPTGR 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01106 862 SUPERFAMILY Protein kinase-like (PK-like) 494 795 IPR011009 -
Phco6g01106 862 FunFam FERONIA receptor-like kinase 30 190 - -
Phco6g01106 862 PANTHER OS07G0166700 PROTEIN 504 799 IPR045272 GO:0004714|GO:0006468
Phco6g01106 862 FunFam FERONIA receptor-like kinase 211 397 - -
Phco6g01106 862 Gene3D - 33 190 - -
Phco6g01106 862 Gene3D - 211 397 - -
Phco6g01106 862 SMART serkin_6 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01106 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Phco6g01106 862 Pfam Malectin-like domain 34 395 IPR024788 -
Phco6g01106 862 Gene3D Transferase(Phosphotransferase) domain 1 596 807 - -
Phco6g01106 862 Pfam Protein tyrosine and serine/threonine kinase 524 720 IPR001245 GO:0004672|GO:0006468
Phco6g01106 862 ProSiteProfiles Protein kinase domain profile. 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01106 862 FunFam Receptor-like protein kinase FERONIA 596 809 - -
Phco6g01106 862 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Phco6g01106 862 CDD STKc_IRAK 526 793 - -
Phco6g01106 862 Gene3D Phosphorylase Kinase; domain 1 482 595 - -
Phco6g01106 862 FunFam receptor-like protein kinase FERONIA 483 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01106 Phco-Chr6 11135413 11138001 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco6g01106 Malectin_like 7e-36 CL0202