Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01073 ATGGAGCATGTGATTGGTGGCAAGTTTAAATTGGGAAGGAAAATTGGGAGTGGGTCTTTTGGGGAGCTCTATTTAGGTGTTAATATACAAACTGGAGAGGAGGTGGCTGTTAAGCTGGAGCCTGTGAAGACCAGGCATCCACAGCTTCACTATGAGTCAAAACTGTATATGCTTCTTCAAGGAGGAACGGGGATTCCCCACCTCAAGTGGTTTGGAACTGAGGGAGATTACAATGTCATGGTTATTGACCTTCTTGGACCAAGTCTGGAAGATTTATTCAATTATTGTAACCGGAAGTTCACACTGAAGACAGTGTTAATGCTTGCTGATCAGTTGATTAACAGAGTTGAATATATGCATTCAAGAGGTTTCCTTCACCGTGACATCAAGCCTGACAATTTCTTAATGGGTTTAGGACGGAAAGCAAATCAAGTGTATGCCATTGATTATGGTCTTGCAAAAAAATATAGGGATCTTCAGACTCATAGGCACATACCATACAGGGAAAACAAGAACCTTACAGGTACAGCACGCTATGCAAGTGTCAATACTCATATTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTGCTCATGTATTTCTTAAGAGGAAGTCTTCCCTGGCAAGGACTTAAGGCTGGCACCAAAAAGCAAAAATATGATAAAATCAGTGAGACAAAGGTGACAACTCCCATAGAGGTGCTTTGCAAATCTTATCCCACCGAATTTGTATCATACTTCCACTATTGCCGATCATTGCGATTTGAGGACAAACCAGATTATTCGTATTTAAAGAGACTTTTCCGAGACCTGTTTATTAGAGAAGGCTATCAGTTTGACTACATTTTTGACTGGACTATGTTAAAGTATCCACAGATCAGTAGCAGCTCAAGAGGGCGGCATGTCACTGGCAAGGCAGCTATGCAAGCAAGTCCACATGTACAAAAGCCAGAAAAAATCTCAGTTGGGAAAGACATTCGAGAGAAATTCTCTGGTGCAGTTGAAGCATTCTCCAGGAGGAATCCTGCAGGTTCAAGTCCTCATGTTGATCACATCAAACAGAGGAGTTTTGAGGATGTACCGGTGCAAAAGGATTTGCACTATGGGCAGCACAATAGTGGTCGATATGGCAGCAGTTCTAGAAGAGCCATGATCACATCAAACAAGCCAGTTTCCTCAGGTGACCATACTGGCAGGCCAACCATAACTGGGAGCCGTCCATCTGGTGTTCATAGAGTTCAACCGGCCTACGACACCAAACAAGCAAATTATGCACGCGGTTCCTCTGCCAGAGGCCACCGTGATGATCCTCTGAGGAGCTTTGAGCTCCTCAACATCAGGAAGTAA 1362 0.4347 MEHVIGGKFKLGRKIGSGSFGELYLGVNIQTGEEVAVKLEPVKTRHPQLHYESKLYMLLQGGTGIPHLKWFGTEGDYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYAIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHIGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISETKVTTPIEVLCKSYPTEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYIFDWTMLKYPQISSSSRGRHVTGKAAMQASPHVQKPEKISVGKDIREKFSGAVEAFSRRNPAGSSPHVDHIKQRSFEDVPVQKDLHYGQHNSGRYGSSSRRAMITSNKPVSSGDHTGRPTITGSRPSGVHRVQPAYDTKQANYARGSSARGHRDDPLRSFELLNIRK 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01073 453 FunFam Putative Casein kinase I 1 85 - -
Phco6g01073 453 CDD STKc_CK1_delta_epsilon 8 282 - -
Phco6g01073 453 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Phco6g01073 453 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01073 453 MobiDBLite consensus disorder prediction 377 413 - -
Phco6g01073 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Phco6g01073 453 Gene3D Transferase(Phosphotransferase) domain 1 1 340 - -
Phco6g01073 453 FunFam Casein kinase 1-like protein 1 330 - -
Phco6g01073 453 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Phco6g01073 453 PANTHER CASEIN KINASE-RELATED 8 332 - -
Phco6g01073 453 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01073 453 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g01073 453 MobiDBLite consensus disorder prediction 372 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01073 Phco-Chr6 10849242 10854882 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Phco6g01073 Pkinase 2.1e-25 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01868 2 49335238 49340417 Phco6g01073 6 10849242 10854882 PCT