Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01061 ATGGGTCTTAGAGACATTGGTGCTTCACTTCCCCCAGGGTTTCGCTTCTATCCGAGTGATGAGGAGTTGGTCCTTCATTACCTTTACAAAAAAGTCACAAATGAGGAAGTTCTGAAGGGTACCTTGATGGAAATTGACCTGCACATATGCGAGCCATGGCAACTTCCAGAGGTGGCTAAGCTTAACGCAAACGAATGGTACTTCTTCAGCTTTCGTGACCGCAAATACGCAACCGGCTACCGGACCAATCGCGCAACAACATCTGGGTATTGGAAAGCCACAGGAAAGGATCGGACGGTGTTTGACCCCTCCACGCGTGAGGTTGTAGGGATGAGAAAGACTTTGGTGTTCTACAGGAACAGGGCCCCAAATGGCATCAAAACGGGTTGGATCATGCACGAGTTTCGTTTGGAGACGCCACATATGCCCCCTAAGGAGGACTGGGTTTTGTGTAGAGTGTTTCACAAAGGCAAAGCAGACAACAGTGCCAAACTCAACTCACAACTCATGTATGAGACCACAGTTCCATCCCTAACTTTGGCTTCGTCATCTCCAACCAACCAAACCATTGGGTATAACCAACTTCCCCATTTCTCTTCCTCAATCACAACCCATCATCATCATCAAAACCAAAACAACAACTCTTTCATGGGTCTCCTTCACTTTTCAAGGGAAACAAATGCAAACTCTAGCAGCATTACTCAAACAAGTCCCAAATGTGATGATGGGTATGGGTTTCTATGGGACATGGAGATGGAAGAAAATAGCTTCCATGATGGGGTGGCCTCTAATATGGTGGACGGAATGAGATTCGAGGTTGATAATAATAGTGTGGTTTTGTTATGA 846 0.461 MGLRDIGASLPPGFRFYPSDEELVLHYLYKKVTNEEVLKGTLMEIDLHICEPWQLPEVAKLNANEWYFFSFRDRKYATGYRTNRATTSGYWKATGKDRTVFDPSTREVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKGKADNSAKLNSQLMYETTVPSLTLASSSPTNQTIGYNQLPHFSSSITTHHHHQNQNNNSFMGLLHFSRETNANSSSITQTSPKCDDGYGFLWDMEMEENSFHDGVASNMVDGMRFEVDNNSVVLL 281
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01061 281 Gene3D NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
Phco6g01061 281 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Phco6g01061 281 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 225 - -
Phco6g01061 281 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Phco6g01061 281 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco6g01061 Phco-Chr6 10658880 10662764 Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco6g01061 NAM 1.7e-36 No_clan