Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g01031 ATGGGGGTTGAGGGGTTGTTTCTGCAAGTTTGTTTTGCACAAGCTGAAGAGATAATAGAGCCAGAAATAATTCCAAATTGCAATTCTCAAACTCCAATTAAAAAGTCCAAGATGACTGGTTCAGGATCTCCCTGTGGAGCCTGCAAATTCTTGAGAAGAAAATGTGTGAGAGGTTGTGTTTTTGCACCTTATTTTTGCCATGAGCAAGGTGCTACTCATTTTGCAGCCATTCATAAGGTCTTTGGTGCAAGCAATGTCTCAAAGCTCCTTGCTCACCTCCCTGTGAGTGACCGTTGTGAAGCTGCAGTCACAATCTCATATGAAGCTCAAGCCAGACTTCAGGATCCAATTTATGGCTGTGTCTCCCATATTTTTGCACTCCAACAACAGGTGGTTTATTTACAAGCTCAGCTGGCTTATCTCAAGGAACAAGCTGCCCAGAGTTGTCTCAATGCCTCTGTCAATGAAAACCCTAGTGAAAAATTATTGTACAAATCTTCAGCTGCTTTACCCCAAGATCTTCAAAGTTGGTTTCAGGTGGAAAATTCCAATTTGGGGCCAGAGTTTCTTCCTAACATGTGTACTAATTTATCAACCCAAAAACATTATGGGAACAATGCTCTCATTGAAGATCTAAACCCTACCTGGATTAATTATGAAAATTCTGGTGCCATGGAAGAAAACAGCTCCTTTTCTAGCTTTGACGAGAGTTCTAATAGCTACTCCATGTCCTATGACATGCACACAAACAGGAGGACGTGGGGTTTTCATGAAGTGGAGGATCTAGGTTCAGTGGCTTTTGGGTACAGTACTCGATCACATTCATGA 828 0.4191 MGVEGLFLQVCFAQAEEIIEPEIIPNCNSQTPIKKSKMTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVYLQAQLAYLKEQAAQSCLNASVNENPSEKLLYKSSAALPQDLQSWFQVENSNLGPEFLPNMCTNLSTQKHYGNNALIEDLNPTWINYENSGAMEENSSFSSFDESSNSYSMSYDMHTNRRTWGFHEVEDLGSVAFGYSTRSHS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g01031 275 ProSiteProfiles LOB domain profile. 43 145 IPR004883 -
Phco6g01031 275 Pfam Lateral organ boundaries (LOB) domain 44 142 IPR004883 -
Phco6g01031 275 PANTHER LOB DOMAIN CONTAINING PROTEIN 38 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g01031 Phco-Chr6 10249639 10251866 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco6g01031 LOB 1.5e-35 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01031 6 10249639 10251866 Phco6g01031 6 10249639 10251866 ECH
Phco2g01836 2 48903046 48903903 Phco6g01031 6 10249639 10251866 PCT