Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00997 ATGGCCAATCACCCTTCCGAACCTCCCACCGACGACTTCCTCGACCAAATCCTCGGCCTACCCACCTTCGCCTCCGCCGACCCCGCCGACGCTTCTCCGATGATGCTCCAGCTCAACTCCGGCGACGCCGCCACCCACCTCGCCGCCGGCGCTGCCTTCCACGCGCCGCCCTACCAGCTGGGCCTCAGCTTGGACCAAGGTAAGGGAGGCTTCCTTTCGCCCGAGGATGCTTCTGGAAGCGGCAACCGCTTCCGCGACGACGTCGTTGATACCAGGCCTAAGAACAACGTTTTTCATGGGCAACCCATGCCAACTACTGTTCCGATTGCTCCACATCCACCAGCAGTGCGACCTAGAGTGCGGGCTAGAAGAGGACAGGCTACAGATCCACACAGCATAGCTGAAAGGTTGCGCAGAGAGAGAATAGCTGAAAGAATCAGGGCTTTACAAGAACTGGTTCCTAGTGTCAACAAGACAGATAGAGCTGCCATGCTGGACGAAATTGTGGATTATGTCAAGTTCTTAAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGATTGGGTGGAGCTGGTGCTGTGGCACCACTAGTAACTGACATCCCATTATCATCAGTCGAGGAAGAAGGCAGTGAGGGAAGAAACCAGCCAGCTTGGGAGAAGTGGTCAAATGATGGCACAGAAAGACAGGTAGCTAAGCTTATGGAAGAAAATGTTGGGGCTGCCATGCAGTTTCTTCAATCAAAAGCACTCTGCATCATGCCTATCTCACTGGCATCAGCAATATACCAGTCACAACCATCAGACACCTCTAGTATAGTTAAACCTGAAACTAGTCCTCCTTCATAG 846 0.5319 MANHPSEPPTDDFLDQILGLPTFASADPADASPMMLQLNSGDAATHLAAGAAFHAPPYQLGLSLDQGKGGFLSPEDASGSGNRFRDDVVDTRPKNNVFHGQPMPTTVPIAPHPPAVRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPSDTSSIVKPETSPPS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00997 281 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 81 260 - -
Phco6g00997 281 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 124 185 IPR036638 GO:0046983
Phco6g00997 281 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 126 175 IPR011598 GO:0046983
Phco6g00997 281 FunFam Basic helix-loop-helix transcription factor 121 183 - -
Phco6g00997 281 Gene3D - 121 183 IPR036638 GO:0046983
Phco6g00997 281 SMART finulus 132 181 IPR011598 GO:0046983
Phco6g00997 281 Pfam Helix-loop-helix DNA-binding domain 131 175 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00997 Phco-Chr6 9803954 9807956 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phco6g00997 HLH 1e-07 No_clan