Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00952 ATGCCAAACACAAGAAATCTTAGGCACCTCAACCTCAACATGTGCTGCTCAAACACACCTACTCCTGAATCAGAATCTCCTCCATTGAGCCCTGTTACTACTTCCTCACATCACAACATTCACTGTTCATCCCCTTCTTCCATGATGATAAAGAACTTCAACTCTATATATGACCCTACCTTAGCCTCTAACCACTCTTTCAGCTCCACTTTCTTCTCCACCACCACCTTCTTCGAACCAGAACCTCAACCTCAACCCGCCGACTTCGCCACTGCTTTCGCCTCTCAGAGGTTTTTCTTCTCCTCACCCGGCCACTCCAACTCCCTCGTTGAATACACCAACAAAACTACTCAACAGCACTCAGCGTCCTTGAGAGAAGATGGTGATGTTGAGAAGATGAAGATGAGTAAGAAGGTGTTGTTCAAGGGGAGCGTGGCGGTGGCGACGTACTCGCCGGACCCTTACATGGATTTCCGGCGGTCGATGCAGGAGATGGTGGAGGCGCGTCCGGAGCTGATGGACGTGAAGTCGAACTGGAATGTGTTGCACGAGCTTCTTCTCTGCTATCTTGCTCTCAACCCAAAGAGCACCCATAAGTTCATTCTTGGTGCTTTTGCGGATCTCCTCGTTAGCCTCATGTCTTTCTAG 648 0.4954 MPNTRNLRHLNLNMCCSNTPTPESESPPLSPVTTSSHHNIHCSSPSSMMIKNFNSIYDPTLASNHSFSSTFFSTTTFFEPEPQPQPADFATAFASQRFFFSSPGHSNSLVEYTNKTTQQHSASLREDGDVEKMKMSKKVLFKGSVAVATYSPDPYMDFRRSMQEMVEARPELMDVKSNWNVLHELLLCYLALNPKSTHKFILGAFADLLVSLMSF 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00952 215 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 48 212 IPR038933 GO:0045892
Phco6g00952 215 NCBIfam uncharacterized plant-specific domain TIGR01568 145 213 IPR006458 -
Phco6g00952 215 MobiDBLite consensus disorder prediction 16 40 - -
Phco6g00952 215 ProSiteProfiles OVATE domain profile. 147 211 IPR006458 -
Phco6g00952 215 Pfam Transcriptional repressor, ovate 151 212 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00952 Phco-Chr6 9284119 9284766 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Phco6g00952 Ovate 1.5e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00952 6 9284119 9284766 Phco6g00952 6 9284119 9284766 ECH
Phco2g01760 2 48086324 48087058 Phco6g00952 6 9284119 9284766 PCT