Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00831 ATGGAGAATAGGGTACCCTTCTTCTTCATCTTCCTGTCCTCTTTCTCACTCACGCTGCTACTTCTCTTGCAACTTTCTTCTGCTCAGATGCCAGGTTTTGTAAGTTTGGACTGTGGTGGTAAAGAAAATTTCACTGACAAAATTGGTCTTGCATGGACCCCTGATGAGCTTAGGTATGGAGAAATAAGCATTATATCAGTTGCAAATGAGACACGGAAGCAATACACAACAGTACGACATTTCCCTGCTGATTCTAGAAAATACTGCTACTCTCTTGATGTTGTCAGTAGAACAAGGTACTTACTGAGGGCGTCGTTCTTGTATGGGAACTTTGATGCAAACAATGTTTATCCAAAATTTGACATTTTTATTGGTGCTACTCATTGGTCAACTATAGTTATATCGGATGCTAACACTATAGAAATGAGAGAGCTCATATTTCTGGCTTTAAGTCCTACAGTTAGTGTATGTTTATCAAATGCAACAACTGGAAAGCCATTCATATCGACGCTTGAACTCCGGCAATTCAATGGTTCAGTTTATTATACATACACTGAGGAACACTTTTACCTCAGTGTCTCCGCAAGGATAAATTTTGGCGCAGATAGTGATGCCCCAATCAGGTATCCTGATGACCCATTTGATAGAATTTGGGAGTCAGATTCTATCAAGAAAGCAAACTATCTTGTTGATGTTGCTGCCGGAACTAGGAAAATTTCCACCAACAAATCAATTGAAGTTAGCAGTGATGAAATGCCACCAATGAAAGTAATGCAGACTGCTGTAGTGGGCACAAACGGATCTCTAACTTACAGGTTGAACTTGGATGGTTTTCCTGGTTTTGCATGGGCAGTCACCTATTTCGCAGAGATTGAAGACTTGGCTGAAAACGAATCCAGGAAATTCAGGCTAGTACTTCCTGGTAATGCAGAAATTAGTAAGCCTGTGGTAAATATTGAAGAAAATGCTCCAGGAAAATATCGCCTTTATGAACCAGGATATACGAATTTATCCTTACCCTTTGTTTTGTCCTTTAAATTTGCCAAAACATCTGATTCTGCCAGGGGTCCTCTTCTAAATGCCATGGAGATTAATGAGTATTTGGAGAAAAATGACGGCTCTCCTGATGGAGAAGTTATATCTGGTGTACTTTCACACTACTCCTCAGAAGAATGGGCACAAGAAGGTGGTGACCCATGTCTACCTGTTCCATGGTCATGGGTCCGCTGTAGCTCAGATCAACAGCCAAAAGTAGTTTCAATTTTGTTGTCCAGTAAAAACTTGACGGGCAATATTCCTCTGGACATAACCAAACTGACTGGTCTGGTTGAACTATGGCTTGATGGTAATATGTTGACTGGCCCAATACCAGATTTCACAGGATGCATGGACTTAAAGATCATTCATCTTGAGAACAATCAGTTGACAGGTGCGCTCCCAACCTCTTTGGTGAACCTTCCAAACTTGAGGGAATTGTATGTCCAAAATAATATGTTATCCGGAACTGTACCATCGGATCTTCTGAAGAAAGTTTCTTTTTTAAACTACTCTGGAAACACTAATCTTCGGAAAGATAGCAGTAAAAAGACCCCCTTGTATGTGATTATTGGTTCAACAGTTGGGGCTGCTGTTCTGCTTTTGGCCACTATTATATCATGCTTGTTTAAGCATAATAAAGGAAAAGGCAGATATTTCGAACAAAAGAGCCTTGTTTCCCACCCTTCTCAAAGTATGGATTGTACTAAAAGCATTGGTCCTGCAGAAGCTGCACACTGCTACAGCTTATCTGAAATTGAAAAATCTACAAATAATTTTGTAAAAAGAATTGGTTCTGGTGGTTTTGGAGTTGTTTACTATGGAAAACTGAATGATGGAAAAGAGATAGCTGTTAAAGTTCTAAACAGCAATTCCTACCAGGGCAAACGAGAGTTCTCCAATGAGGTGACTCTTCTCTCAAGAATACATCATAGAAACTTGGTACAGCTTTTTGGCTATTGTCGAGAAGAAGGAAATAGCATGCTTATTTATGAGTTCATGCATAATGGAACTCTCAAGGAACATCTGTACGCCCCATTAACACAAGGACGGAGTATCGATTGGAAGAAGCGCCTAGAGATTGCAGAAGACGCTGCAAAAGGGATTGAGTATCTTCACACAGGCTGTGTTCCTGCAGTCATCCATAGAGACTTAAAAAGCAGCAACATTCTTCTTGACCGACACATGAAAGCCAAGGTTTCAGATTTTGGTCTTTCAAAACTTGCTGTGGATGGGGCCTCCCATGTTTCTAGCATAGTTCGAGGGACTGTAGGATATTTGGATCCTGAGTACTATATTTCTCAGCAGCTTACTGACAAGAGTGATATTTATAGCTTTGGCGTAATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCTAATGACAGCTTTGGTGCTAATTGCCGAAACATAGTCCAGTGGGCAAAATTACACATTGCGAGTGGAGACATACAAGGTATTATTGATCCTGTGCTACAGAACAAGTATGACCTGCAATCAATGTGGAAAATAGCGGAGAAAGCATTGTTGTGTGTTGAGCCACATGGACACGATCGGCCATCAATTTCAGAAGTTGTGAAGGAGATACAAGATGCAATTGCCATTGAGAGAGAAGCCGAAGGAAATTCAGATGAGCCAAGAAATTCGGTTCATTCTTCAGTCAACATGGATTTGGCTGCTCCTGAGAGCTTCCTTTCAGTTGATGATTCCATTGCCCAACAACAACCTACTGCACGATAG 2778 0.4071 MENRVPFFFIFLSSFSLTLLLLLQLSSAQMPGFVSLDCGGKENFTDKIGLAWTPDELRYGEISIISVANETRKQYTTVRHFPADSRKYCYSLDVVSRTRYLLRASFLYGNFDANNVYPKFDIFIGATHWSTIVISDANTIEMRELIFLALSPTVSVCLSNATTGKPFISTLELRQFNGSVYYTYTEEHFYLSVSARINFGADSDAPIRYPDDPFDRIWESDSIKKANYLVDVAAGTRKISTNKSIEVSSDEMPPMKVMQTAVVGTNGSLTYRLNLDGFPGFAWAVTYFAEIEDLAENESRKFRLVLPGNAEISKPVVNIEENAPGKYRLYEPGYTNLSLPFVLSFKFAKTSDSARGPLLNAMEINEYLEKNDGSPDGEVISGVLSHYSSEEWAQEGGDPCLPVPWSWVRCSSDQQPKVVSILLSSKNLTGNIPLDITKLTGLVELWLDGNMLTGPIPDFTGCMDLKIIHLENNQLTGALPTSLVNLPNLRELYVQNNMLSGTVPSDLLKKVSFLNYSGNTNLRKDSSKKTPLYVIIGSTVGAAVLLLATIISCLFKHNKGKGRYFEQKSLVSHPSQSMDCTKSIGPAEAAHCYSLSEIEKSTNNFVKRIGSGGFGVVYYGKLNDGKEIAVKVLNSNSYQGKREFSNEVTLLSRIHHRNLVQLFGYCREEGNSMLIYEFMHNGTLKEHLYAPLTQGRSIDWKKRLEIAEDAAKGIEYLHTGCVPAVIHRDLKSSNILLDRHMKAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDIYSFGVILLELISGQEAISNDSFGANCRNIVQWAKLHIASGDIQGIIDPVLQNKYDLQSMWKIAEKALLCVEPHGHDRPSISEVVKEIQDAIAIEREAEGNSDEPRNSVHSSVNMDLAAPESFLSVDDSIAQQQPTAR 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00831 925 CDD STKc_IRAK 609 876 - -
Phco6g00831 925 Gene3D Ribonuclease Inhibitor 381 530 IPR032675 -
Phco6g00831 925 ProSiteProfiles Protein kinase domain profile. 603 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00831 925 PANTHER OS07G0107800 PROTEIN-RELATED 465 879 - -
Phco6g00831 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 725 737 IPR008271 GO:0004672|GO:0006468
Phco6g00831 925 Pfam Protein kinase domain 606 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00831 925 ProSitePatterns Protein kinases ATP-binding region signature. 609 631 IPR017441 GO:0005524
Phco6g00831 925 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 679 888 - -
Phco6g00831 925 FunFam Leucine-rich repeat receptor-like protein kinase 579 678 - -
Phco6g00831 925 Gene3D Transferase(Phosphotransferase) domain 1 679 902 - -
Phco6g00831 925 Pfam Malectin-like domain 36 364 IPR024788 -
Phco6g00831 925 SUPERFAMILY Protein kinase-like (PK-like) 585 873 IPR011009 -
Phco6g00831 925 SUPERFAMILY L domain-like 403 524 - -
Phco6g00831 925 SMART serkin_6 603 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00831 925 Gene3D Phosphorylase Kinase; domain 1 578 678 - -
Phco6g00831 925 FunFam Leucine-rich repeat protein kinase family protein 378 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00831 Phco-Chr6 8189568 8195847 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Phco6g00831 Malectin_like 7.5e-76 CL0202