Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00745 ATGGGGGAGTGGATGGAGAAGAGGGCGCAGGTGCTTGATATGAAGGTGATGAAGGAGAAGAAATCAGATGCCGAAAGCCAGCATGACGACTATAATGAATTTAAGAGCGATGAAGATAAAGATGATAGTCAGTACAAAAAGGAGAAGAAGGAGAGAAGGAAGAAAAAACTGAGTGAAGAAGGCAAAAGTAAGGAGTATAATGAATTTGAAAGCAATGAAGGTGAAGATGATGCCCAAAGTAAGAAGAGGAAGAAGAAAAAACTGAGTACAGAGAGCAAAAGTAAGGAGTATAAAGTCCTTGAAAGGAATGAAGGTGAAGGTGATGTAGAAGGTAAGAAAAAACTGAGCAATGAAGATAAAGATGATAGTCAATACAAAAAGGAGAAGAAGGAGAGGAGGAAGAAAAAACTGAGTGAAGAAGGCAAAAGTAAGGAGTATAATGAATTTGAAAGCAATGAAGGTGAAGATGATACCCAAAGTAAGAAGAGGAAGAAGAAGAAAAAACTGAGTACAGAAAGCAAAAGTAAGGAGTATAAAGTCCTTGAAAGGAATGAAGGTGAAGGTGAAGGTGATGTAGAAGGTAAGAAAAAACTGAGTGATGAAGATAAAGATGATAGTCAATACAAAAAGGAGAAGAAGGAGAGGAGGAAGAAAAAACTGAGTGAAGAAGGCAAAGGTAAGGAGTATAATGAATTTGAAAGCAATGAAGGAGAAGATGATGCCCAAAGTAAGAAGAGGAAGAAGAAAAAACTGAGTACAGAAAGCAAAAGTAAGGAGTATAAAGTCCTTGAAAGGAATGAAGGTGAAGGTGATGTAGAATGTAAGAAGAGGAAGTTGGAAAAACTGAGTGAAGAAGGCAAAAGTAAGGAGTATAATGAGTGTGAAAACAATGAAGTTGGAGATGATGCCCAGGGTGGGAAGAGGAAGAAGAAAAAATTGAGTAAAGAAAGCAAAAGTGAGGAGTACAATGTCTTTGAAAGGAACGAAGGGGAAGATGATGTCAAAGGTAAGAAGACGAAGAAAAAAAAACTTAAGGAGTATAATGAATTTGAAAACAATGAAGTTGAAGATGATGCCCAAGGTAAGAAGAAAAAAATGAGTATAGAAAGCACAAGTGAGGAGTATAATGTCTTTGAAAGGAACGAAGGGGAAGATGATGTCAAAGGTAAGAAGACGAAGAAAAAAAAACTAAGTGAAGAAGGCAAAAGTAAGGAGTATAATGAATTTGAAAACAATGAAGTTGAAGACGACGCCCAAGGTAAGAAGAAAAAAATGAGTAAAGAAAGCACAAGTGAGGAGTATAATGCCTTTGAAAGGAACGAAGGGGAAGATGATGTCAAAGGTAAGAAGACGAAGAAAAAAAAACTTAAGGAGTATAATGAATTTGAAAACAATGAAGTTGAAGATGATGCCCAAGGTAAGAAGAAAAAATTGAGTAAAGAAAGCAAAAGTAAGGAGTATAATGTCTTTGAAAGGAATGAAGGTGAAGATGATGTTGAAGGTAAGAAGAAAAAAAAGAGTGAAGACAGCAAAAGCAAGGACAAAAAGATGATGGCAAGGAAGAAAGCCAAGGCAGGTAATGATGGCTCTCTTAATCCTTCACCCAGTGGATTATCCAAACCCAAACGGGTAACTTTTTCTGATCAAGTGGAGGTTTGTTGTGATGGTTTAGTCCGTGGGAAACGGTTTACACTAGAAGAAGATGAGATGATTAAACAGTCTGTTTTTAATTATATAGAGTCTCGTGGTCTGGGAGATGAAGGCCTAAATATGGTTCTCCATTGTGGCAGTCATCCGGAAGTTAGACATTGTTGGAAGGAAATTGCAGCAGCCTTACCTCACAGGCCACTTGCTAGTGTGTATACTCGTGCTCATATTTTGTTTGAAAGGGCTGAGGAGAGAAAGTGGACACCTGAAGAGTATGAATTTTTATTGAAAGTCAAGGAACAGCATGGATCTAACTGGAGACAAGTAGCTGACGCATTGGGCAAAAATCGTATTCATGTAAAGGATGCATGGCGCAGAGTGAAATTAAGGGAATTAACTAGAGGACGCTGGACCCAAGACGAGTATCAAAATTTATTCAATTTAGTGAACCTGGACCTACGTGTGAGGGCTTCACAGGGTTATAGAAAATCAAGACATGGTATGTTGCGAGATAATATTGGTTGGGAGGAAATTAGTAACAAGTTGACCTCTAGAACCAGCGTTAGCTGCTGCGAAAAGTGGTATCGTAAATTAACATCACCTATGGTTGCTAGTGGTGAATGGAGTGATACTGATGACTATCGCCTGGTCGATGCTTTATTTAATTTGGATGCGTGCTGCATGGAGGAGGTGGATTGGGACAATCTGCTTGAGCATAGGTCTGGGGATGTATGTAGAAAACGGTGGAACGAAATTGTGCGATATATTGGAGAGCACGGGGGGAAGTCATTTGCTGAGCAGGTTGAACTTCTTACAAAAAGATTTTGCCCCGAATTATTGGAAGTAAGAGAGGCCTTTGATGCAAAACCTTTGGTTTGTTGA 2529 0.3867 MGEWMEKRAQVLDMKVMKEKKSDAESQHDDYNEFKSDEDKDDSQYKKEKKERRKKKLSEEGKSKEYNEFESNEGEDDAQSKKRKKKKLSTESKSKEYKVLERNEGEGDVEGKKKLSNEDKDDSQYKKEKKERRKKKLSEEGKSKEYNEFESNEGEDDTQSKKRKKKKKLSTESKSKEYKVLERNEGEGEGDVEGKKKLSDEDKDDSQYKKEKKERRKKKLSEEGKGKEYNEFESNEGEDDAQSKKRKKKKLSTESKSKEYKVLERNEGEGDVECKKRKLEKLSEEGKSKEYNECENNEVGDDAQGGKRKKKKLSKESKSEEYNVFERNEGEDDVKGKKTKKKKLKEYNEFENNEVEDDAQGKKKKMSIESTSEEYNVFERNEGEDDVKGKKTKKKKLSEEGKSKEYNEFENNEVEDDAQGKKKKMSKESTSEEYNAFERNEGEDDVKGKKTKKKKLKEYNEFENNEVEDDAQGKKKKLSKESKSKEYNVFERNEGEDDVEGKKKKKSEDSKSKDKKMMARKKAKAGNDGSLNPSPSGLSKPKRVTFSDQVEVCCDGLVRGKRFTLEEDEMIKQSVFNYIESRGLGDEGLNMVLHCGSHPEVRHCWKEIAAALPHRPLASVYTRAHILFERAEERKWTPEEYEFLLKVKEQHGSNWRQVADALGKNRIHVKDAWRRVKLRELTRGRWTQDEYQNLFNLVNLDLRVRASQGYRKSRHGMLRDNIGWEEISNKLTSRTSVSCCEKWYRKLTSPMVASGEWSDTDDYRLVDALFNLDACCMEEVDWDNLLEHRSGDVCRKRWNEIVRYIGEHGGKSFAEQVELLTKRFCPELLEVREAFDAKPLVC 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00745 842 PANTHER GB|AAC33480.1 247 841 - -
Phco6g00745 842 SMART sant 753 804 IPR001005 -
Phco6g00745 842 SMART sant 632 679 IPR001005 -
Phco6g00745 842 SMART sant 559 630 IPR001005 -
Phco6g00745 842 SMART sant 682 749 IPR001005 -
Phco6g00745 842 Gene3D - 676 752 - -
Phco6g00745 842 MobiDBLite consensus disorder prediction 16 162 - -
Phco6g00745 842 ProSiteProfiles Myb-like domain profile. 678 747 IPR001005 -
Phco6g00745 842 MobiDBLite consensus disorder prediction 16 543 - -
Phco6g00745 842 MobiDBLite consensus disorder prediction 171 516 - -
Phco6g00745 842 Coils Coil 120 140 - -
Phco6g00745 842 ProSiteProfiles Myb-like domain profile. 749 802 IPR001005 -
Phco6g00745 842 Coils Coil 40 60 - -
Phco6g00745 842 Coils Coil 203 223 - -
Phco6g00745 842 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 634 681 IPR017930 -
Phco6g00745 842 SMART EF-1_beta_acid_2 232 258 IPR018940 -
Phco6g00745 842 SMART EF-1_beta_acid_2 262 289 IPR018940 -
Phco6g00745 842 SMART EF-1_beta_acid_2 69 95 IPR018940 -
Phco6g00745 842 SMART EF-1_beta_acid_2 489 516 IPR018940 -
Phco6g00745 842 SMART EF-1_beta_acid_2 436 463 IPR018940 -
Phco6g00745 842 SMART EF-1_beta_acid_2 34 60 IPR018940 -
Phco6g00745 842 SMART EF-1_beta_acid_2 324 351 IPR018940 -
Phco6g00745 842 SMART EF-1_beta_acid_2 377 404 IPR018940 -
Phco6g00745 842 SMART EF-1_beta_acid_2 149 175 IPR018940 -
Phco6g00745 842 SUPERFAMILY Homeodomain-like 727 806 IPR009057 -
Phco6g00745 842 Coils Coil 265 285 - -
Phco6g00745 842 Pfam Myb-like DNA-binding domain 636 694 - -
Phco6g00745 842 Gene3D - 637 675 - -
Phco6g00745 842 MobiDBLite consensus disorder prediction 529 543 - -
Phco6g00745 842 SUPERFAMILY Homeodomain-like 634 694 IPR009057 -
Phco6g00745 842 ProSiteProfiles Myb-like domain profile. 628 677 IPR001005 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phco6g00745 Myb_DNA-bind_6 5.1e-11 CL0123