Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00741 ATGATTATGATGTCAACCTCGTGCCTCTTCATCCTTGCTCTCCTTCATTCGTTGCTTCTCTCTTTCCAAGTGATCTCAGTTTCTATGAATGTGCCAATTGCTTCATCTGAACGAGCTAAAACATTGTTACTTAAACCTTCTGGGCAATCTCCATCTCAAGGTCCTATTGTGACTCCAAGACCAAAACTTCCTCATTTTGACCATCATCACCACAGTTGGAAACCTTATCCTGTGGTTCCATCCCCCTATAAAGACCCAGCTTGTAGGCAAATCTGTACTGATCCATTCACTTCAACTCCTTTTGGTTCACCTTGTGGTTGTATATTTCCCATGAAAGTCAGACTAGTACTGGGTATAGCTCCTTTGCTTGTTTTTCCAGTCATTACTGAGTTAGAGATCGAAGTTGCATCTGGAACATATTTGAAGCAGAGCCAAGTGAGGATAATAGGTGTCAGTGCTGACAATCGAAATCAGTGGAGAACCATAGTTGATATTGACTTGGTTCCACTTGGGGAAAAATTTGACAATACCACTGCACTTCTGCTGTATGAGAGGTTTTCGCACAACAAAGTTCCTCTAAATAGGAGCCTTTTTGGTCATTATGCAACTTTGTACATTGCTTATCCAGGTATTCCATCATCACGGCCACCTGGATATATAATTGGGAGTAGTCCCCTGCCTGGTGATACAGTTGGTTTTCTCCCATTCTCTGCCTCCTTCATGAGTGAGCATGAGAAATTGACTCTTAGAACCGTACTCATTATTGCTCTATGTTCTGCTGTACTCTTGTTGGTTTTGGTTGGAGCATTTTTCATTTTGTTGAAATGGTGGAAAATTAGGAGCTCATCAAGTGCTATCGGCCCTTCTCTCACATCTTATCTAAATAAGAGATCTGGCTTGGAATCTATGTTGTCAGGCAGAATTATGAGCTCTAGATCTATGTCCCTTGTGTCCACTATTGCTGCTTCTATTCTCTCTGTTAAAACATTTTCCTTTTCCGAGCTTGAGAAAGCAACAGATAGATTCAGTTCTCAGAGAATATTAGGAGAAGGAGGATTTGGACGTGTTTATTCTGGAACATTGGATGATGGAAATGAAGTTGCAGTTAAGCTGCTAACGAAGGATGATCAGAATGGAGACCGTGAATTTATTGCTGAAGTTGAGATGCTAAGCCGTTTGCATCATCGTAATCTTGTGAAACTCTTTGGTATATGCATAGAAGGGAGAAAGCGTTGCTTGGTGTATGAGCTTGTTTACAATGGCAGTGTTGAGTCTCATTTGCATGGTGATGACAAGAAAAGCAGCCCTCTAGATTGGGAAGCACGGAAAAAAATTGCCCTTGGATCGGCAAGAGGTTTGGCCTATCTACATGAGGATTCCAATCCTCGTGTAATTCACCGAGACTTTAAAGCTAGCAACGTGTTGTTAGAAGATGACTTTACCCCTAAGGTTTCTGATTTTGGGTTAGCAAGAGAAGCGGGTGAAGGAAATGATCATATTTCTACAAGGGTCATGGGTACTTTTGGGTATGTCGCTCCAGAATATGCTATGACAGGTCATTTACTGGTTAAAAGTGATGTCTATAGTTATGGTGTTTTCCTGCTTGAGCTCATAACAGGCAGAAAACCAGTGGACATGTCTCAACCTCATGGAGAGGAGAATCTTGTAACGTGGGCTCGACCACTGTTGAGATTCAAAGAAGGTTTAGAAAAGCTGGTGGATCCATTTTTGGCTGGAAAGTATGAGTTTGATGACATGGCAAAGGTGGCTGCTATTGCTTCCATGTGCGTACACCCAGAGGTCACTCAAAGGCCTTTTATGGGTGAAGTTGTGCAGGCTCTTAAGTTGATCTACAACGACACCAATGAGAGTGAGAAGGAGTCCTTTTGGCATGAATCGGATTTTGGAGGTGACCTTGTGTTTTCTGATGGCAGTTGGTTGGATGGTGAAGGGGTAACCCCGACATTAACTTATGGACAAGAATCTTCCCTCATCACTATGGAGTACAGTTCTGGTCTACTTGAAATGGAAAAGGGATCATCAAGCTTGAATGCAGATGAGACATCTTTGCCCATCAGGCACGGGAACAGATCAGGCCCCTTAAGAACAGCCCGGGGTAAGCCATCCTTTAGTAAGCTCACTCGAAGTCGGAGTGATCATGTGGTATCCTTTCAAGCATGTTTGGAATGA 2190 0.4269 MIMMSTSCLFILALLHSLLLSFQVISVSMNVPIASSERAKTLLLKPSGQSPSQGPIVTPRPKLPHFDHHHHSWKPYPVVPSPYKDPACRQICTDPFTSTPFGSPCGCIFPMKVRLVLGIAPLLVFPVITELEIEVASGTYLKQSQVRIIGVSADNRNQWRTIVDIDLVPLGEKFDNTTALLLYERFSHNKVPLNRSLFGHYATLYIAYPGIPSSRPPGYIIGSSPLPGDTVGFLPFSASFMSEHEKLTLRTVLIIALCSAVLLLVLVGAFFILLKWWKIRSSSSAIGPSLTSYLNKRSGLESMLSGRIMSSRSMSLVSTIAASILSVKTFSFSELEKATDRFSSQRILGEGGFGRVYSGTLDDGNEVAVKLLTKDDQNGDREFIAEVEMLSRLHHRNLVKLFGICIEGRKRCLVYELVYNGSVESHLHGDDKKSSPLDWEARKKIALGSARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREAGEGNDHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVFLLELITGRKPVDMSQPHGEENLVTWARPLLRFKEGLEKLVDPFLAGKYEFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTNESEKESFWHESDFGGDLVFSDGSWLDGEGVTPTLTYGQESSLITMEYSSGLLEMEKGSSSLNADETSLPIRHGNRSGPLRTARGKPSFSKLTRSRSDHVVSFQACLE 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00741 729 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Phco6g00741 729 MobiDBLite consensus disorder prediction 683 710 - -
Phco6g00741 729 Gene3D Transferase(Phosphotransferase) domain 1 418 635 - -
Phco6g00741 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Phco6g00741 729 PANTHER OS01G0750732 PROTEIN 86 627 - -
Phco6g00741 729 SUPERFAMILY Protein kinase-like (PK-like) 326 620 IPR011009 -
Phco6g00741 729 ProSiteProfiles Protein kinase domain profile. 342 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00741 729 Pfam Protein tyrosine and serine/threonine kinase 345 613 IPR001245 GO:0004672|GO:0006468
Phco6g00741 729 FunFam Receptor-like serine/threonine-protein kinase ALE2 418 631 - -
Phco6g00741 729 FunFam receptor-like serine/threonine-protein kinase ALE2 315 417 - -
Phco6g00741 729 Gene3D Phosphorylase Kinase; domain 1 315 417 - -
Phco6g00741 729 CDD STKc_IRAK 348 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00741 Phco-Chr6 7336219 7342662 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Phco6g00741 PK_Tyr_Ser-Thr 9.1e-46 CL0016