Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00682 ATGCCAAACACAAAAGAGAACAAGGGGATTTCTGGTTTTGTTGAGTCAGAAAAGCCGAAGCTTTTTGGGATCAAATTATATCTATTTGAACTTAAGTCTAGTTCAAGTGAGGTAGCAATGAAGTGTTTTCCATTCTACTTTGGAGAGAAGAAGGATGGTTCGAAGCGCTTGCAGTCGATATCGGGTCGGTCCAACAGTTCTACTTTTGTTGAGGCTGAGATGAGGAGATCTGGTTCTGAATTGAACTCTATGGATGCCTCAGACACCAGCACAGACTCCCTTAGGAGAAATGCATTTCCCAGTTTGTCGCAAAGACCCAGCAACCTCAGAGTATTTACTGTTCCCGAACTAAAAACAGCCACAAAGAGTTTTAGTCGCGGTGTGATGCTTGGAGAGGGTGGGTTTGGGTGTGTCTACAAGGGGTTGATCAAGAGTGTAGATGATCCTTCCACAAGAACTGAAGTTGCGGTTAAGCAGCTTGGCAGAAGAGGAATTCAGGGGCACAAGGAATGGGTAACAGAAGTGAATGTTCTGGGTATTGTGGAGCATCCGAATCTGGTGAAACTAGTGGGATACTGTGCTGATGATGATGAAAGAGGAATCCAGAGGCTTCTGGTTTATGAATATATGCCCAACAGAAGTGTGGAACACCATTTATCACCACGATCAGAAACTCCTCTCCCATGGAGTAGGAGGTTGAAAATAGCCCAAGATGCGGCTCGAGGCTTAACATACCTGCATGAGGAAATAGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTTTGGACGAGCAGTGGAAGGCAAAGCTGTCAGACTTTGGGCTAGCAAGATTAGGACCATCTGATGGGTTCACTCATGTCTCAACAGCGGTAGTTGGAACAATGGGTTATGCAGCTCCAGAGTATGTTCAAACCGGACGTCTTACATCAAAGAGTGATGTATGGAGCTATGGTGTCTTCCTTTATGAGCTGATTACAGGCCGGCGTCCTATTGACCGAAATCGCCCCAAGGGTGAGCAGAAGATGTTGGAATGGATAAGGCCATACCTTTCAGATGGGAGGAAATTTCAAATAATATTGGATCCAAGACTTGAGAGGAAACACCTCTTCAAGTCAGCACAGAAGCTTGCTGTAATAGCCAACAAATGCTTGGTCAGAAACCCAAAGAATCGCCCAAAGATGAGTGAAGTGTTACAAATGGTGACTCAGGTTGTGGAGTCTTCAGTGAGTACTAATCCACAGCCACCCTTGAAGAGTGTTGTAGCCTCAGAAGAAGCTTCTCAGGATATTGAAACAGTGAACAAGAAAATTACCATGGATCAAAATCCAGATTGTAATTGGTTAAGGATGTTATGGCCAAAACTTTTAAGAAGATGTAGATAG 1395 0.4366 MPNTKENKGISGFVESEKPKLFGIKLYLFELKSSSSEVAMKCFPFYFGEKKDGSKRLQSISGRSNSSTFVEAEMRRSGSELNSMDASDTSTDSLRRNAFPSLSQRPSNLRVFTVPELKTATKSFSRGVMLGEGGFGCVYKGLIKSVDDPSTRTEVAVKQLGRRGIQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLVYEYMPNRSVEHHLSPRSETPLPWSRRLKIAQDAARGLTYLHEEIDFQIIFRDFKSSNILLDEQWKAKLSDFGLARLGPSDGFTHVSTAVVGTMGYAAPEYVQTGRLTSKSDVWSYGVFLYELITGRRPIDRNRPKGEQKMLEWIRPYLSDGRKFQIILDPRLERKHLFKSAQKLAVIANKCLVRNPKNRPKMSEVLQMVTQVVESSVSTNPQPPLKSVVASEEASQDIETVNKKITMDQNPDCNWLRMLWPKLLRRCR 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00682 464 PANTHER OS01G0588500 PROTEIN-RELATED 84 408 - -
Phco6g00682 464 Pfam Protein kinase domain 127 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00682 464 ProSiteProfiles Protein kinase domain profile. 124 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00682 464 FunFam Serine/threonine-protein kinase PCRK2 210 419 - -
Phco6g00682 464 ProSitePatterns Protein kinases ATP-binding region signature. 130 158 IPR017441 GO:0005524
Phco6g00682 464 FunFam Serine/threonine-protein kinase BIK1 91 209 - -
Phco6g00682 464 Gene3D Transferase(Phosphotransferase) domain 1 210 425 - -
Phco6g00682 464 SUPERFAMILY Protein kinase-like (PK-like) 100 405 IPR011009 -
Phco6g00682 464 Gene3D Phosphorylase Kinase; domain 1 97 209 - -
Phco6g00682 464 MobiDBLite consensus disorder prediction 68 92 - -
Phco6g00682 464 CDD STKc_IRAK 130 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00682 Phco-Chr6 6808850 6812092 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phco6g00682 Pkinase 9e-48 CL0016