Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00680 ATGACCTCACATGTTGTCCTACAAAATTTCCCTCACTCCGAAACCAAACTCTCCCCAACTACCACCGCCGATTCCCCACCAACTGCGCCGTCACTTGCCGTCACTAAGAGGTCCTCCGCCGCCGTCACGCGCTCCACCAAAGACCGCCACACCAAGGTCAACGGCCGCGGCCGCCGCGTCCGAATGCCTCCGCTCTGCGCCGCGCGAATTTTCCAGCTCACGCGCGAGCTCGGCCACCGCTCCGACGGTGAGACCATCGAGTGGCTCCTCCGCCACGCCGAGCCTTCCATCATCGCAGCCACTGGCTCCGGTACCGTCCCCTCTGATCCCATATCCTCCGTAGCAACCTCCGTTCCCTCCTCTGAGTCCTCCATCGCGGTACCGGTGGTAGGCGGGCAGGGAATGTTCTCCATGGCGCCGCCAAGTTGCCGACTCGACCTGTCCCCGCCGCCGGGGATGGAGTTCGCGGCGTCGAACGGCTATCGGCACATGCCGTTCACGGCACTGCTGTTGCAGCCGGCTACGGTGGAGGATAACCAGAACGACGAGTCTCTCGGCGAACAATGA 567 0.6367 MTSHVVLQNFPHSETKLSPTTTADSPPTAPSLAVTKRSSAAVTRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGSGTVPSDPISSVATSVPSSESSIAVPVVGGQGMFSMAPPSCRLDLSPPPGMEFAASNGYRHMPFTALLLQPATVEDNQNDESLGEQ 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00680 188 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 31 131 IPR005333 GO:0003700
Phco6g00680 188 Pfam TCP family transcription factor 45 125 IPR017887 -
Phco6g00680 188 MobiDBLite consensus disorder prediction 1 41 - -
Phco6g00680 188 ProSiteProfiles TCP domain profile. 46 100 IPR017887 -
Phco6g00680 188 MobiDBLite consensus disorder prediction 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00680 Phco-Chr6 6794900 6795466 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phco6g00680 TCP 1.2e-28 No_clan